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Aliases for PIR43293 Gene

Subcategory (RNA class) for PIR43293 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR43293 Gene

No Aliases found

ORGUL Members for PIR43293 Gene

Previous GeneCards Identifiers for PIR43293 Gene

  • GC10M101470

No data available for External Ids for PIR43293 Gene

Summaries for PIR43293 Gene

GeneCards Summary for PIR43293 Gene

PIR43293 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR43293 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR43293 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR43293 Gene

Genomics for PIR43293 Gene

GeneHancer (GH) Regulatory Elements for PIR43293 Gene

Promoters and enhancers for PIR43293 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J099707 Enhancer 1.2 Ensembl ENCODE dbSUPER 600.7 +0.5 514 3 CREM IKZF1 DPF2 BACH1 IKZF2 NFE2L2 LEF1 PKNOX1 ZNF316 EP300 PIR46681 PIR43293 ENTPD7 NKX2-3 GOT1 ENSG00000224934 BLOC1S2 GC10M099706 CUTC PIR46433
GH10J099711 Enhancer 0.8 Ensembl ENCODE 600.7 -1.7 -1702 0.4 CTCF RAD21 ARID2 REST TRIM22 ZNF316 RFX5 SMC3 ZNF654 ZNF24 GC10M099706 PIR35000 PIR46681 PIR43293 NKX2-3 CUTC COX15 ENSG00000285932 ENTPD7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR43293 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR43293 Gene

Genomic Locations for PIR43293 Gene
chr10:99,709,671-99,709,698
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr10:101,469,428-101,469,455
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR43293 Gene

Genes around PIR43293 on UCSC Golden Path with GeneCards custom track

PIR43293 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR43293 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR43293 Gene

Proteins for PIR43293 Gene

Post-translational modifications for PIR43293 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR43293 Gene

Domains & Families for PIR43293 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR43293 Gene

Function for PIR43293 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR43293 Gene

Localization for PIR43293 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR43293 Gene

Pathways & Interactions for PIR43293 Gene

PathCards logo

SuperPathways for PIR43293 Gene

No Data Available

Interacting Proteins for PIR43293 Gene

Gene Ontology (GO) - Biological Process for PIR43293 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR43293 Gene

Drugs & Compounds for PIR43293 Gene

No Compound Related Data Available

Transcripts for PIR43293 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR43293 Gene

No ASD Table

Relevant External Links for PIR43293 Gene

GeneLoc Exon Structure for
PIR43293

No data available for mRNA/cDNA for PIR43293 Gene

Expression for PIR43293 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR43293 Gene

Orthologs for PIR43293 Gene

No data available for Orthologs and Evolution for PIR43293 Gene

Paralogs for PIR43293 Gene

No data available for Paralogs for PIR43293 Gene

Variants for PIR43293 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR43293 Gene

Disorders for PIR43293 Gene

No disorders were found for PIR43293 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR43293 Gene

Publications for PIR43293 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR43293 Gene

Products for PIR43293 Gene

Sources for PIR43293 Gene

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