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Aliases for PIR42505 Gene

Subcategory (RNA class) for PIR42505 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR42505 Gene

No Aliases found

Previous GeneCards Identifiers for PIR42505 Gene

  • GC22M037441
  • GC22M038405
  • GC22M038794
  • GC22M039911
  • GC22M040602
  • GC22M041044
  • GC22M041442

No data available for External Ids for PIR42505 Gene

Summaries for PIR42505 Gene

GeneCards Summary for PIR42505 Gene

PIR42505 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR42505 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR42505

Additional gene information for PIR42505 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR42505 Gene

Genomics for PIR42505 Gene

GeneHancer (GH) Regulatory Elements for PIR42505 Gene

Promoters and enhancers for PIR42505 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22I037353 Enhancer 0.4 ENCODE 550.8 +1.7 1665 0.2 POLR2A MAX RFX5 LOC100506271 GC22M042204 GC22M042211 GC22M042215 GC22M042280 GC22M042287 GC22M042294 GC22M042298 GC22M042308 GC22M042348
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR42505 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR42505 Gene

Genomic Locations for PIR42505 Gene
chr22:37,355,630-37,355,661
(GRCh38/hg38)
Size:
32 bases
Orientation:
Minus strand

Genomic View for PIR42505 Gene

Genes around PIR42505 on UCSC Golden Path with GeneCards custom track

PIR42505 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR42505 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR42505 Gene

ORGUL Member Location for PIR42505 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR42505 Gene

Proteins for PIR42505 Gene

Post-translational modifications for PIR42505 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR42505 Gene

Domains & Families for PIR42505 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR42505 Gene

Function for PIR42505 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR42505 Gene

Localization for PIR42505 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR42505 Gene

Pathways & Interactions for PIR42505 Gene

SuperPathways for PIR42505 Gene

No Data Available

Interacting Proteins for PIR42505 Gene

Gene Ontology (GO) - Biological Process for PIR42505 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR42505 Gene

Drugs & Compounds for PIR42505 Gene

No Compound Related Data Available

Transcripts for PIR42505 Gene

fRNAdb Secondary structures for PIR42505 Gene

  • FR315579
  • FR161676

Alternative Splicing Database (ASD) splice patterns (SP) for PIR42505 Gene

No ASD Table

Relevant External Links for PIR42505 Gene

GeneLoc Exon Structure for
PIR42505

No data available for mRNA/cDNA for PIR42505 Gene

Expression for PIR42505 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR42505 Gene

Orthologs for PIR42505 Gene

No data available for Orthologs and Evolution for PIR42505 Gene

Paralogs for PIR42505 Gene

No data available for Paralogs for PIR42505 Gene

Variants for PIR42505 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR42505 Gene

Disorders for PIR42505 Gene

No disorders were found for PIR42505 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR42505 Gene

Publications for PIR42505 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR42505 Gene

Sources for PIR42505 Gene

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