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Aliases for PIR42480 Gene

Subcategory (RNA class) for PIR42480 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR42480 Gene

No Aliases found

ORGUL Members for PIR42480 Gene

Previous GeneCards Identifiers for PIR42480 Gene

  • GC15M051547
  • GC15M052008
  • GC15M052943
  • GC15M053404
  • GC15M054047
  • GC15M051255
  • GC15M051262
  • GC15M052612
  • GC15M054291
  • GC15M054942
  • GC15M055383
  • GC15M055838
  • GC15M056269

No data available for External Ids for PIR42480 Gene

Summaries for PIR42480 Gene

GeneCards Summary for PIR42480 Gene

PIR42480 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR42480 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR42480 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR42480 Gene

Genomics for PIR42480 Gene

GeneHancer (GH) Regulatory Elements for PIR42480 Gene

Promoters and enhancers for PIR42480 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J051253 Enhancer 0.5 FANTOM5 650.7 +0.7 670 0.3 ZFHX2 EGR2 GC15M057503 GC15M057573 PIR38801 PIR57162 PIR42480 PIR62092 CYP19A1 DMXL2 SPPL2A GC15M057839
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR42480 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR42480 Gene

Genomic Locations for PIR42480 Gene
chr15:51,254,212-51,254,243
(GRCh38/hg38)
Size:
32 bases
Orientation:
Minus strand
chr15:51,546,409-51,546,440
(GRCh37/hg19)
Size:
32 bases
Orientation:
Minus strand

Genomic View for PIR42480 Gene

Genes around PIR42480 on UCSC Golden Path with GeneCards custom track

PIR42480 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR42480 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR42480 Gene

ORGUL Member Location for PIR42480 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR42480 Gene

Function for PIR42480 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR42480 Gene

Localization for PIR42480 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR42480 Gene

Pathways & Interactions for PIR42480 Gene

SuperPathways for PIR42480 Gene

No Data Available

Interacting Proteins for PIR42480 Gene

Gene Ontology (GO) - Biological Process for PIR42480 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR42480 Gene

Drugs & Compounds for PIR42480 Gene

No Compound Related Data Available

Transcripts for PIR42480 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR42480 Gene

No ASD Table

Relevant External Links for PIR42480 Gene

GeneLoc Exon Structure for
PIR42480

No data available for mRNA/cDNA for PIR42480 Gene

Expression for PIR42480 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR42480 Gene

Orthologs for PIR42480 Gene

No data available for Orthologs and Evolution for PIR42480 Gene

Paralogs for PIR42480 Gene

No data available for Paralogs for PIR42480 Gene

Variants for PIR42480 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR42480 Gene

Disorders for PIR42480 Gene

No disorders were found for PIR42480 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR42480 Gene

Publications for PIR42480 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR42480 Gene

Sources for PIR42480 Gene

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