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Aliases for PIR42444 Gene

Subcategory (RNA class) for PIR42444 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR42444 Gene

No Aliases found

ORGUL Members for PIR42444 Gene

Previous GeneCards Identifiers for PIR42444 Gene

  • GC18M011734
  • GC18M011951
  • GC18M012528
  • GC18M012817
  • GC18M013218
  • GC18M012181
  • GC18M012479
  • GC18M013516
  • GC18M013811
  • GC18M014071
  • GC18M014339
  • GC18M014658
  • GC18M014922

No data available for External Ids for PIR42444 Gene

Summaries for PIR42444 Gene

GeneCards Summary for PIR42444 Gene

PIR42444 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR42444 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR42444

Additional gene information for PIR42444 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR42444 Gene

Genomics for PIR42444 Gene

GeneHancer (GH) Regulatory Elements for PIR42444 Gene

Promoters and enhancers for PIR42444 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J011655 Enhancer 0.8 Ensembl ENCODE 650.7 +1.0 958 0.5 CTCF KLF1 ZNF654 BACH1 REST RAD21 ZNF217 XRCC5 ARID2 ZNF143 GC18M015449 GC18M015452 GC18M015459 GC18M015466 GC18M015467 GC18M015472 GC18M015475 GC18M015479 GC18M015480 GC18M015484
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR42444 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR42444 Gene

Genomic Locations for PIR42444 Gene
chr18:11,656,475-11,656,506
(GRCh38/hg38)
Size:
32 bases
Orientation:
Minus strand
chr18:11,656,474-11,656,505
(GRCh37/hg19)
Size:
32 bases
Orientation:
Minus strand

Genomic View for PIR42444 Gene

Genes around PIR42444 on UCSC Golden Path with GeneCards custom track

PIR42444 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR42444 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR42444 Gene

ORGUL Member Location for PIR42444 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR42444 Gene

Function for PIR42444 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR42444 Gene

Localization for PIR42444 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR42444 Gene

Pathways & Interactions for PIR42444 Gene

SuperPathways for PIR42444 Gene

No Data Available

Interacting Proteins for PIR42444 Gene

Gene Ontology (GO) - Biological Process for PIR42444 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR42444 Gene

Drugs & Compounds for PIR42444 Gene

No Compound Related Data Available

Transcripts for PIR42444 Gene

fRNAdb Secondary structures for PIR42444 Gene

  • FR279271

Alternative Splicing Database (ASD) splice patterns (SP) for PIR42444 Gene

No ASD Table

Relevant External Links for PIR42444 Gene

GeneLoc Exon Structure for
PIR42444

No data available for mRNA/cDNA for PIR42444 Gene

Expression for PIR42444 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR42444 Gene

Orthologs for PIR42444 Gene

No data available for Orthologs and Evolution for PIR42444 Gene

Paralogs for PIR42444 Gene

No data available for Paralogs for PIR42444 Gene

Variants for PIR42444 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR42444 Gene

Disorders for PIR42444 Gene

No disorders were found for PIR42444 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR42444 Gene

Publications for PIR42444 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR42444 Gene

Sources for PIR42444 Gene

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