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Aliases for PIR42074 Gene

Subcategory (RNA class) for PIR42074 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR42074 Gene

No Aliases found

ORGUL Members for PIR42074 Gene

Previous GeneCards Identifiers for PIR42074 Gene

  • GC16P000772
  • GC16P000821
  • GC16P000864
  • GC16P001056
  • GC16P000879
  • GC16P000898
  • GC16P000914
  • GC16P000935
  • GC16P000953
  • GC16P000985
  • GC16P001006
  • GC16P001025

No data available for External Ids for PIR42074 Gene

Summaries for PIR42074 Gene

GeneCards Summary for PIR42074 Gene

PIR42074 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR42074 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR42074 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR42074 Gene

Genomics for PIR42074 Gene

GeneHancer (GH) Regulatory Elements for PIR42074 Gene

Promoters and enhancers for PIR42074 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J000718 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 600.7 -1.3 -1327 3.6 CTCF ZFX MNT SIX5 ZNF148 NKRF POLR2A ZNF121 ZNF687 AHR PIR42074 FAM173A UBE2I IFT140 CRAMP1 ENSG00000261505 UNKL LUC7L TELO2 ENSG00000268836
GH16J000722 Promoter 0.7 Ensembl 600.7 +0.6 611 0.2 ZNF692 SNRNP70 POLR2A PIR42074 TELO2 WASH4P UNKL ENSG00000269482 ENSG00000268836 CRAMP1 LUC7L RHOT2 ENSG00000260051
GH16J000724 Promoter 0.8 Ensembl 0.7 +2.6 2611 0.2 ZNF600 ZIC2 POLR2A HIC1 CIAO3 CCDC78 HAGHL PIR42074
GH16J000725 Enhancer 0.5 ENCODE 0.7 +3.7 3696 0.1 POLR2A GLIS2 ZEB2 ZNF692 ZEB1 ZFHX2 EGR2 CCDC78 HAGHL PIR42074
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR42074 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR42074 Gene

Genomic Locations for PIR42074 Gene
chr16:722,090-722,119
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr16:772,090-772,119
(GRCh37/hg19)
Size:
30 bases
Orientation:
Plus strand

Genomic View for PIR42074 Gene

Genes around PIR42074 on UCSC Golden Path with GeneCards custom track

PIR42074 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR42074 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR42074 Gene

Proteins for PIR42074 Gene

Post-translational modifications for PIR42074 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR42074 Gene

Domains & Families for PIR42074 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR42074 Gene

Function for PIR42074 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR42074 Gene

Localization for PIR42074 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR42074 Gene

Pathways & Interactions for PIR42074 Gene

PathCards logo

SuperPathways for PIR42074 Gene

No Data Available

Interacting Proteins for PIR42074 Gene

Gene Ontology (GO) - Biological Process for PIR42074 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR42074 Gene

Drugs & Compounds for PIR42074 Gene

No Compound Related Data Available

Transcripts for PIR42074 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR42074 Gene

No ASD Table

Relevant External Links for PIR42074 Gene

GeneLoc Exon Structure for
PIR42074

No data available for mRNA/cDNA for PIR42074 Gene

Expression for PIR42074 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR42074 Gene

Orthologs for PIR42074 Gene

No data available for Orthologs and Evolution for PIR42074 Gene

Paralogs for PIR42074 Gene

No data available for Paralogs for PIR42074 Gene

Variants for PIR42074 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR42074 Gene

Disorders for PIR42074 Gene

No disorders were found for PIR42074 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR42074 Gene

Publications for PIR42074 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR42074 Gene

Products for PIR42074 Gene

Sources for PIR42074 Gene

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