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Aliases for PIR41760 Gene

Subcategory (RNA class) for PIR41760 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR41760 Gene

No Aliases found

ORGUL Members for PIR41760 Gene

Previous GeneCards Identifiers for PIR41760 Gene

  • GC02P231911

No data available for External Ids for PIR41760 Gene

Summaries for PIR41760 Gene

GeneCards Summary for PIR41760 Gene

PIR41760 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR41760 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR41760

Additional gene information for PIR41760 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR41760 Gene

Genomics for PIR41760 Gene

GeneHancer (GH) Regulatory Elements for PIR41760 Gene

Promoters and enhancers for PIR41760 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I231047 Enhancer 1 ENCODE dbSUPER 550.8 +0.9 905 0.2 FOXA2 ARID4B THRB ZNF48 RARA CREM THAP11 PAF1 MXD4 KAT8 GC02P231047 PIR41760 ENSG00000261829 C2orf72
GH02I231049 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.8 +3.3 3330 2.4 FOXA2 MLX ZFP64 ARID4B DMAP1 ZNF48 ETS1 YY1 SLC30A9 PAF1 ENSG00000261829 C2orf72 NCL RPL28P2 DIS3L2 PDE6D GC02P231047 PIR41760
GH02I231037 Promoter/Enhancer 1.7 EPDnew Ensembl dbSUPER 0.4 -9.2 -9195 0.8 CTCF SAP130 ZNF449 ZNF48 ZKSCAN1 ZNF335 E2F1 POLR2A ZBTB48 VEZF1 C2orf72 PIR41760 GC02P231047
GH02I231040 Enhancer 1 ENCODE dbSUPER 0.4 -6.6 -6574 0.8 ELF3 FOXA2 MLX ARID4B THRB ZNF48 RAD21 RARA YY1 PAF1 C2orf72 SPATA3 SPATA3-AS1 PIR41760 GC02P231047
GH02I231039 Enhancer 0.6 ENCODE dbSUPER 0.4 -7.4 -7401 0.1 POLR2A EZH2 C2orf72 PIR41760 GC02P231047
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR41760 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR41760 Gene

Genomic Locations for PIR41760 Gene
chr2:231,046,996-231,047,026
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chr2:231,911,711-231,911,741
(GRCh37/hg19)

Genomic View for PIR41760 Gene

Genes around PIR41760 on UCSC Golden Path with GeneCards custom track

PIR41760 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR41760 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR41760 Gene

ORGUL Member Location for PIR41760 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR41760 Gene

Proteins for PIR41760 Gene

Post-translational modifications for PIR41760 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR41760 Gene

Domains & Families for PIR41760 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR41760 Gene

Function for PIR41760 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR41760 Gene

Localization for PIR41760 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR41760 Gene

Pathways & Interactions for PIR41760 Gene

SuperPathways for PIR41760 Gene

No Data Available

Interacting Proteins for PIR41760 Gene

Gene Ontology (GO) - Biological Process for PIR41760 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR41760 Gene

Drugs & Compounds for PIR41760 Gene

No Compound Related Data Available

Transcripts for PIR41760 Gene

fRNAdb Secondary structures for PIR41760 Gene

  • FR285059

Alternative Splicing Database (ASD) splice patterns (SP) for PIR41760 Gene

No ASD Table

Relevant External Links for PIR41760 Gene

GeneLoc Exon Structure for
PIR41760

No data available for mRNA/cDNA for PIR41760 Gene

Expression for PIR41760 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR41760 Gene

Orthologs for PIR41760 Gene

No data available for Orthologs and Evolution for PIR41760 Gene

Paralogs for PIR41760 Gene

No data available for Paralogs for PIR41760 Gene

Variants for PIR41760 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR41760 Gene

Disorders for PIR41760 Gene

No disorders were found for PIR41760 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR41760 Gene

Publications for PIR41760 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR41760 Gene

Sources for PIR41760 Gene

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