Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR41702 Gene

Subcategory (RNA class) for PIR41702 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR41702 Gene

No Aliases found

ORGUL Members for PIR41702 Gene

Previous GeneCards Identifiers for PIR41702 Gene

  • GC01P019560

No data available for External Ids for PIR41702 Gene

Summaries for PIR41702 Gene

GeneCards Summary for PIR41702 Gene

PIR41702 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR41702 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR41702 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR41702 Gene

Genomics for PIR41702 Gene

GeneHancer (GH) Regulatory Elements for PIR41702 Gene

Promoters and enhancers for PIR41702 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J019231 Enhancer 0.6 ENCODE 600.7 -1.4 -1392 1.9 SP1 RXRA FOXA2 KLF4 JUND YY1 GABPA RAD21 CTCF HNF4A PIR41702 EMC1 MRTO4 AKR7A3 EMC1-AS1
GH01J019241 Enhancer 0.8 ENCODE 0.4 +7.3 7296 0.2 ELF3 ZFX CTCF CEBPG GTF2F1 RAD21 CEBPA ZNF143 REST TRIM22 EMC1 RNU6-1099P SLC66A1 AKR7A2 AKR7A3 PIR41702
GH01J019221 Promoter 0.6 Ensembl 0.4 -13.0 -13035 0.2 POLR2A EMC1-AS1 PIR41702 EMC1
GH01J019240 Enhancer 0.5 Ensembl 0.4 +6.8 6765 0.2 CTCF ZNF316 MAFG POLR2A EMSY RNU6-1099P AKR7A2 SLC66A1 PIR41702 EMC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR41702 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR41702 Gene

Genomic Locations for PIR41702 Gene
chr1:19,234,136-19,234,164
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr1:19,560,630-19,560,658
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR41702 Gene

Genes around PIR41702 on UCSC Golden Path with GeneCards custom track

PIR41702 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR41702 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR41702 Gene

Proteins for PIR41702 Gene

Post-translational modifications for PIR41702 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR41702 Gene

Domains & Families for PIR41702 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR41702 Gene

Function for PIR41702 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR41702 Gene

Localization for PIR41702 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR41702 Gene

Pathways & Interactions for PIR41702 Gene

PathCards logo

SuperPathways for PIR41702 Gene

No Data Available

Interacting Proteins for PIR41702 Gene

Gene Ontology (GO) - Biological Process for PIR41702 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR41702 Gene

Drugs & Compounds for PIR41702 Gene

No Compound Related Data Available

Transcripts for PIR41702 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR41702 Gene

No ASD Table

Relevant External Links for PIR41702 Gene

GeneLoc Exon Structure for
PIR41702

No data available for mRNA/cDNA for PIR41702 Gene

Expression for PIR41702 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR41702 Gene

Orthologs for PIR41702 Gene

No data available for Orthologs and Evolution for PIR41702 Gene

Paralogs for PIR41702 Gene

No data available for Paralogs for PIR41702 Gene

Variants for PIR41702 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR41702 Gene

Disorders for PIR41702 Gene

No disorders were found for PIR41702 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR41702 Gene

Publications for PIR41702 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR41702 Gene

Products for PIR41702 Gene

Sources for PIR41702 Gene

Content
Loading form....