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Aliases for PIR41590 Gene

Subcategory (RNA class) for PIR41590 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR41590 Gene

No Aliases found

ORGUL Members for PIR41590 Gene

Previous GeneCards Identifiers for PIR41590 Gene

  • GC08P024960

No data available for External Ids for PIR41590 Gene

Summaries for PIR41590 Gene

GeneCards Summary for PIR41590 Gene

PIR41590 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR41590 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR41590 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR41590 Gene

Genomics for PIR41590 Gene

GeneHancer (GH) Regulatory Elements for PIR41590 Gene

Promoters and enhancers for PIR41590 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J025104 Enhancer 0.2 ENCODE 600.7 +1.3 1341 0.6 PIR41590 LOC100421161
GH08J025098 Enhancer 0.7 Ensembl ENCODE 0.7 -4.3 -4251 1.2 ZNF680 USF1 ZNF143 USF2 HLF PIR41590 GC08M024931
GH08J025072 Enhancer 0.8 Ensembl ENCODE 0.3 -28.0 -28046 5.2 MAFK SP1 ZNF211 NFE2 FOSL2 NFE2L2 JUN BACH1 ZBTB6 NEFM ENSG00000253535 GC08M024931 PIR41590
GH08J025067 Enhancer 0.4 Ensembl 0.3 -35.5 -35451 1.2 CEBPA HNF4A GC08M024931 PIR41590
GH08J025064 Enhancer 0.4 Ensembl 0.3 -38.1 -38052 0.8 PRDM1 CTCF NEFM ENSG00000253535 GC08M024931 PIR41590
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR41590 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR41590 Gene

Genomic Locations for PIR41590 Gene
chr8:25,103,052-25,103,083
(GRCh38/hg38)
Size:
32 bases
Orientation:
Plus strand
chr8:24,960,567-24,960,598
(GRCh37/hg19)
Size:
32 bases
Orientation:
Plus strand

Genomic View for PIR41590 Gene

Genes around PIR41590 on UCSC Golden Path with GeneCards custom track

PIR41590 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR41590 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR41590 Gene

Proteins for PIR41590 Gene

Post-translational modifications for PIR41590 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR41590 Gene

Domains & Families for PIR41590 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR41590 Gene

Function for PIR41590 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR41590 Gene

Localization for PIR41590 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR41590 Gene

Pathways & Interactions for PIR41590 Gene

PathCards logo

SuperPathways for PIR41590 Gene

No Data Available

Interacting Proteins for PIR41590 Gene

Gene Ontology (GO) - Biological Process for PIR41590 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR41590 Gene

Drugs & Compounds for PIR41590 Gene

No Compound Related Data Available

Transcripts for PIR41590 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR41590 Gene

No ASD Table

Relevant External Links for PIR41590 Gene

GeneLoc Exon Structure for
PIR41590

No data available for mRNA/cDNA for PIR41590 Gene

Expression for PIR41590 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR41590 Gene

Orthologs for PIR41590 Gene

No data available for Orthologs and Evolution for PIR41590 Gene

Paralogs for PIR41590 Gene

No data available for Paralogs for PIR41590 Gene

Variants for PIR41590 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR41590 Gene

Disorders for PIR41590 Gene

No disorders were found for PIR41590 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR41590 Gene

Publications for PIR41590 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR41590 Gene

Products for PIR41590 Gene

Sources for PIR41590 Gene

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