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Aliases for PIR41391 Gene

Subcategory (RNA class) for PIR41391 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR41391 Gene

No Aliases found

ORGUL Members for PIR41391 Gene

Previous GeneCards Identifiers for PIR41391 Gene

  • GC12P000658

No data available for External Ids for PIR41391 Gene

Summaries for PIR41391 Gene

GeneCards Summary for PIR41391 Gene

PIR41391 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR41391 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR41391 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR41391 Gene

Genomics for PIR41391 Gene

GeneHancer (GH) Regulatory Elements for PIR41391 Gene

Promoters and enhancers for PIR41391 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J000548 Enhancer 0.4 Ensembl dbSUPER 600.7 -0.9 -869 1.4 PIR41391 B4GALNT3 GC12M000504
GH12J000546 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 0.7 -2.7 -2668 1.4 CTCF PRDM1 RAD21 ARID2 ZBTB8A ZNF600 LEF1 ZNF143 REST LARP7 B4GALNT3 PIR41391 GC12M000504
GH12J000553 Promoter/Enhancer 1.1 Ensembl ENCODE dbSUPER 0.7 +4.1 4050 1.2 POLR2A RUNX3 ETV6 B4GALNT3 PIR41391 GC12M000554
GH12J000537 Promoter/Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -10.9 -10880 3.1 ZNF121 MZF1 CREB1 RXRA POLR2A CTCF NR2F2 ZNF189 ZFP3 ZNF664 B4GALNT3 SLC6A12 ERC1 PIR41391 GC12M000504
GH12J000552 Promoter/Enhancer 1 Ensembl dbSUPER 0.7 +2.9 2932 0.2 RAD51 POLR2A USF2 L3MBTL2 SREBF1 B4GALNT3 PIR41391 GC12M000554
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR41391 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR41391 Gene

Genomic Locations for PIR41391 Gene
chr12:549,769-549,796
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr12:658,935-658,962
(GRCh37/hg19)
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR41391 Gene

Genes around PIR41391 on UCSC Golden Path with GeneCards custom track

PIR41391 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR41391 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR41391 Gene

Proteins for PIR41391 Gene

Post-translational modifications for PIR41391 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR41391 Gene

Domains & Families for PIR41391 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR41391 Gene

Function for PIR41391 Gene

Phenotypes From GWAS Catalog for PIR41391 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR41391 Gene

Localization for PIR41391 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR41391 Gene

Pathways & Interactions for PIR41391 Gene

PathCards logo

SuperPathways for PIR41391 Gene

No Data Available

Interacting Proteins for PIR41391 Gene

Gene Ontology (GO) - Biological Process for PIR41391 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR41391 Gene

Drugs & Compounds for PIR41391 Gene

No Compound Related Data Available

Transcripts for PIR41391 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR41391 Gene

No ASD Table

Relevant External Links for PIR41391 Gene

GeneLoc Exon Structure for
PIR41391

No data available for mRNA/cDNA for PIR41391 Gene

Expression for PIR41391 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR41391 Gene

Orthologs for PIR41391 Gene

No data available for Orthologs and Evolution for PIR41391 Gene

Paralogs for PIR41391 Gene

No data available for Paralogs for PIR41391 Gene

Variants for PIR41391 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR41391 Gene

Disorders for PIR41391 Gene

No disorders were found for PIR41391 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR41391 Gene

Publications for PIR41391 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR41391 Gene

Products for PIR41391 Gene

Sources for PIR41391 Gene

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