Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR41330 Gene

Subcategory (RNA class) for PIR41330 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR41330 Gene

No Aliases found

ORGUL Members for PIR41330 Gene

Previous GeneCards Identifiers for PIR41330 Gene

  • GC19P012416

No data available for External Ids for PIR41330 Gene

Summaries for PIR41330 Gene

GeneCards Summary for PIR41330 Gene

PIR41330 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR41330 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR41330 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR41330 Gene

Genomics for PIR41330 Gene

GeneHancer (GH) Regulatory Elements for PIR41330 Gene

Promoters and enhancers for PIR41330 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J012330 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.3 +27.0 27041 4.4 SP1 ELF3 CBFA2T2 ZNF148 NKRF POLR2A CEBPG RERE TFE3 RELA ZNF563 ZNF20 ZNF878 ZNF44 ZNF433 ZNF136 ZNF763 SYCE2 ZNF788P GC19M012347
GH19J012314 Enhancer 0.9 ENCODE dbSUPER 0.4 +9.4 9436 0.2 CEBPG TFE3 RXRA GATAD2A SP1 IRF2 KMT2B MNT SOX13 TCF7 PIR41330 GC19M012347
GH19J012325 Enhancer 1 Ensembl dbSUPER 0.3 +20.6 20628 0.6 ZNF652 ELF3 CEBPG RERE HNF1A PPARG SP5 HMG20B CEBPA GATAD2A ZNF563 PIR41330 GC19M012347
GH19J012347 Enhancer 0.5 ENCODE 0.3 +41.8 41816 0.2 ZNF652 CTCF RAD21 REST RUNX3 SMC3 GC19M012347 PIR44087 ZNF563 ZNF442 PIR41330
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR41330 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR41330 Gene

Genomic Locations for PIR41330 Gene
chr19:12,305,286-12,305,314
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr19:12,416,101-12,416,129
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR41330 Gene

Genes around PIR41330 on UCSC Golden Path with GeneCards custom track

PIR41330 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR41330 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR41330 Gene

Proteins for PIR41330 Gene

Post-translational modifications for PIR41330 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR41330 Gene

Domains & Families for PIR41330 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR41330 Gene

Function for PIR41330 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR41330 Gene

Localization for PIR41330 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR41330 Gene

Pathways & Interactions for PIR41330 Gene

PathCards logo

SuperPathways for PIR41330 Gene

No Data Available

Interacting Proteins for PIR41330 Gene

Gene Ontology (GO) - Biological Process for PIR41330 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR41330 Gene

Drugs & Compounds for PIR41330 Gene

No Compound Related Data Available

Transcripts for PIR41330 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR41330 Gene

No ASD Table

Relevant External Links for PIR41330 Gene

GeneLoc Exon Structure for
PIR41330

No data available for mRNA/cDNA for PIR41330 Gene

Expression for PIR41330 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR41330 Gene

Orthologs for PIR41330 Gene

No data available for Orthologs and Evolution for PIR41330 Gene

Paralogs for PIR41330 Gene

No data available for Paralogs for PIR41330 Gene

Variants for PIR41330 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR41330 Gene

Disorders for PIR41330 Gene

No disorders were found for PIR41330 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR41330 Gene

Publications for PIR41330 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR41330 Gene

Products for PIR41330 Gene

Sources for PIR41330 Gene

Content
Loading form....