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Aliases for PIR41327 Gene

Subcategory (RNA class) for PIR41327 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR41327 Gene

No Aliases found

Previous GeneCards Identifiers for PIR41327 Gene

  • GC06P117851
  • GC11M012957

No data available for External Ids for PIR41327 Gene

Summaries for PIR41327 Gene

GeneCards Summary for PIR41327 Gene

PIR41327 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR41327 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR41327 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR41327 Gene

Genomics for PIR41327 Gene

GeneHancer (GH) Regulatory Elements for PIR41327 Gene

Promoters and enhancers for PIR41327 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J117529 Enhancer 0.7 Ensembl dbSUPER 600.7 +1.1 1076 1.2 ZFX RXRA POLR2A MGA EMSY L3MBTL2 PIR41327 ENSG00000226181 DCBLD1 RNU6-253P ENSG00000282218
GH06J117481 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 -47.2 -47170 4.3 ZNF652 ZFX ELF3 MNT NKRF POLR2A MLLT1 ZNF121 CEBPG RERE DCBLD1 ENSG00000230202 RNU6-253P PIR41327 ENSG00000282218
GH06J117534 Enhancer 0.8 Ensembl ENCODE 0.7 +4.9 4918 0.9 SP1 RXRA JUND NR2F2 RAD21 HNF4A MAX REST EGR1 DCBLD1 ENSG00000226181 RNU6-253P PIR41327 ENSG00000282218
GH06J117490 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -35.5 -35492 9.1 MAFK MZF1 IKZF1 POLR2A IKZF2 ZNF316 SP1 DPF2 EED RUNX3 DCBLD1 RNU6-253P ENSG00000226181 PIR41327 ENSG00000282218
GH06J117544 Enhancer 1.1 Ensembl ENCODE 0.4 +14.6 14601 1.2 ELF3 MNT CBFA2T2 CEBPG ZNF24 TFE3 SP1 PPARG KAT8 CREB1 ENSG00000226181 DCBLD1 NUS1 GOPC PIR41327 ENSG00000282218
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR41327 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR41327 Gene

Genomic Locations for PIR41327 Gene
chr6:117,530,421-117,530,451
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand

Genomic View for PIR41327 Gene

Genes around PIR41327 on UCSC Golden Path with GeneCards custom track

PIR41327 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR41327 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR41327 Gene

ORGUL Member Location for PIR41327 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR41327 Gene

Proteins for PIR41327 Gene

Post-translational modifications for PIR41327 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR41327 Gene

Domains & Families for PIR41327 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR41327 Gene

Function for PIR41327 Gene

Phenotypes From GWAS Catalog for PIR41327 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR41327 Gene

Localization for PIR41327 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR41327 Gene

Pathways & Interactions for PIR41327 Gene

PathCards logo

SuperPathways for PIR41327 Gene

No Data Available

Interacting Proteins for PIR41327 Gene

Gene Ontology (GO) - Biological Process for PIR41327 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR41327 Gene

Drugs & Compounds for PIR41327 Gene

No Compound Related Data Available

Transcripts for PIR41327 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR41327 Gene

No ASD Table

Relevant External Links for PIR41327 Gene

GeneLoc Exon Structure for
PIR41327

No data available for mRNA/cDNA for PIR41327 Gene

Expression for PIR41327 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR41327 Gene

Orthologs for PIR41327 Gene

No data available for Orthologs and Evolution for PIR41327 Gene

Paralogs for PIR41327 Gene

No data available for Paralogs for PIR41327 Gene

Variants for PIR41327 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR41327 Gene

Disorders for PIR41327 Gene

No disorders were found for PIR41327 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR41327 Gene

Publications for PIR41327 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR41327 Gene

Products for PIR41327 Gene

Sources for PIR41327 Gene

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