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Aliases for PIR41201 Gene

Subcategory (RNA class) for PIR41201 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR41201 Gene

No Aliases found

ORGUL Members for PIR41201 Gene

Previous GeneCards Identifiers for PIR41201 Gene

  • GC01M015929

No data available for External Ids for PIR41201 Gene

Summaries for PIR41201 Gene

GeneCards Summary for PIR41201 Gene

PIR41201 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR41201 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR41201 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR41201 Gene

Genomics for PIR41201 Gene

GeneHancer (GH) Regulatory Elements for PIR41201 Gene

Promoters and enhancers for PIR41201 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J015601 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 600.7 +0.2 217 3.7 SP1 ELF3 MNT CBFA2T2 NKRF POLR2A CEBPG RERE CSDE1 ZNF384 CHCHD2P6 ENSG00000237301 GC01P015603 GC01P015607 PIR54927 PIR41201 PIR62449 ENSG00000237938 ARHGEF19 CROCCP3
GH01J015597 Enhancer 0.7 ENCODE dbSUPER 0.7 +4.5 4511 1.6 ZNF121 BCOR ZBTB5 KDM1A FBLIM1 AGMAT SLC25A34 ENSG00000237301 PIR41201
GH01J015596 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +6.3 6266 1 SP7 PKNOX1 RXRA SP1 ZNF341 MCM3 ZBTB17 MEF2D MCM7 ZNF48 FBLIM1 CASP9 SZRD1 RPL22P3 ENSG00000178715 ENSG00000237938 SCARNA21B ENSG00000224621 ARHGEF19 AGMAT
GH01J015595 Enhancer 0.9 Ensembl dbSUPER 0.4 +7.7 7666 1 CTCF ZNF384 PKNOX1 ZNF7 REST ZEB2 USF1 RAD21 SMC3 ELF1 SCARNA21B AGMAT SLC25A34 PIR41201 ENSG00000237301
GH01J015588 Promoter 0.8 EPDnew 0.4 +14.6 14630 0.1 CC2D1A ZBTB33 CHAMP1 NFYC AGMAT PIR41201 ENSG00000237301 DNAJC16
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR41201 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR41201 Gene

Genomic Locations for PIR41201 Gene
chr1:15,603,140-15,603,167
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr1:15,929,635-15,929,662
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR41201 Gene

Genes around PIR41201 on UCSC Golden Path with GeneCards custom track

PIR41201 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR41201 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR41201 Gene

Proteins for PIR41201 Gene

Post-translational modifications for PIR41201 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR41201 Gene

Domains & Families for PIR41201 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR41201 Gene

Function for PIR41201 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR41201 Gene

Localization for PIR41201 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR41201 Gene

Pathways & Interactions for PIR41201 Gene

PathCards logo

SuperPathways for PIR41201 Gene

No Data Available

Interacting Proteins for PIR41201 Gene

Gene Ontology (GO) - Biological Process for PIR41201 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR41201 Gene

Drugs & Compounds for PIR41201 Gene

No Compound Related Data Available

Transcripts for PIR41201 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR41201 Gene

No ASD Table

Relevant External Links for PIR41201 Gene

GeneLoc Exon Structure for
PIR41201

No data available for mRNA/cDNA for PIR41201 Gene

Expression for PIR41201 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR41201 Gene

Orthologs for PIR41201 Gene

No data available for Orthologs and Evolution for PIR41201 Gene

Paralogs for PIR41201 Gene

No data available for Paralogs for PIR41201 Gene

Variants for PIR41201 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR41201 Gene

Disorders for PIR41201 Gene

No disorders were found for PIR41201 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR41201 Gene

Publications for PIR41201 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR41201 Gene

Products for PIR41201 Gene

Sources for PIR41201 Gene

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