Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR41118 Gene

Subcategory (RNA class) for PIR41118 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR41118 Gene

No Aliases found

ORGUL Members for PIR41118 Gene

Previous GeneCards Identifiers for PIR41118 Gene

  • GC10M046963

No data available for External Ids for PIR41118 Gene

Summaries for PIR41118 Gene

GeneCards Summary for PIR41118 Gene

PIR41118 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR41118 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR41118 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR41118 Gene

Genomics for PIR41118 Gene

GeneHancer (GH) Regulatory Elements for PIR41118 Gene

Promoters and enhancers for PIR41118 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J046586 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 600.7 +1.0 1022 0.8 CC2D1A CTCF CEBPG ZNF384 CDC5L TFE3 PPARG SP5 EGR1 ARID2 PIR41118 SYT15 ENSG00000229227 ENSG00000231187 LOC101927699
GH10J046581 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 0.4 -6.9 -6869 1.8 ARNT EZH2 ZBTB26 RNF2 MCM3 GABPB1 ZNF143 SIN3A SYT15 WASHC2C PARGP1 SHLD2P1 BMS1P2 PIR41118
GH10J046596 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 0.4 +12.0 12004 2 CC2D1A CTCF MNT MLLT1 ZNF121 ZSCAN21 CDC5L MCM2 ZNF24 MAFK ENSG00000229227 ENSG00000231187 LOC101927699 WASHC2C AGAP4 PARGP1 PIR41118
GH10J046582 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.7 -2.9 -2946 0.4 ATF1 CREM PIR41118 SYT15 LOC101927699 ENSG00000231187
GH10J046589 Enhancer 0.7 ENCODE 0.7 +3.8 3823 0.9 MCM2 KLF14 PRDM1 CREB1 RNF2 YBX1 MCM7 JUND FOXA2 PKNOX1 PIR41118 ENSG00000229227 ENSG00000231187 LOC101927699 SYT15
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR41118 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR41118 Gene

Genomic Locations for PIR41118 Gene
chr10:46,585,747-46,585,773
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr10:46,963,843-46,963,869
(GRCh37/hg19)
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR41118 Gene

Genes around PIR41118 on UCSC Golden Path with GeneCards custom track

PIR41118 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR41118 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR41118 Gene

Proteins for PIR41118 Gene

Post-translational modifications for PIR41118 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR41118 Gene

Domains & Families for PIR41118 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR41118 Gene

Function for PIR41118 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR41118 Gene

Localization for PIR41118 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR41118 Gene

Pathways & Interactions for PIR41118 Gene

PathCards logo

SuperPathways for PIR41118 Gene

No Data Available

Interacting Proteins for PIR41118 Gene

Gene Ontology (GO) - Biological Process for PIR41118 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR41118 Gene

Drugs & Compounds for PIR41118 Gene

No Compound Related Data Available

Transcripts for PIR41118 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR41118 Gene

No ASD Table

Relevant External Links for PIR41118 Gene

GeneLoc Exon Structure for
PIR41118

No data available for mRNA/cDNA for PIR41118 Gene

Expression for PIR41118 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR41118 Gene

Orthologs for PIR41118 Gene

No data available for Orthologs and Evolution for PIR41118 Gene

Paralogs for PIR41118 Gene

No data available for Paralogs for PIR41118 Gene

Variants for PIR41118 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR41118 Gene

Disorders for PIR41118 Gene

No disorders were found for PIR41118 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR41118 Gene

Publications for PIR41118 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR41118 Gene

Products for PIR41118 Gene

Sources for PIR41118 Gene

Content
Loading form....