Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR40961 Gene

Subcategory (RNA class) for PIR40961 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR40961 Gene

No Aliases found

ORGUL Members for PIR40961 Gene

Previous GeneCards Identifiers for PIR40961 Gene

  • GC17P036284

No data available for External Ids for PIR40961 Gene

Summaries for PIR40961 Gene

GeneCards Summary for PIR40961 Gene

PIR40961 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR40961 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR40961 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR40961 Gene

Genomics for PIR40961 Gene

GeneHancer (GH) Regulatory Elements for PIR40961 Gene

Promoters and enhancers for PIR40961 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J074571 Enhancer 0.2 dbSUPER 650.7 -1.0 -1038 1.6 PIR40961 LOC101928343 CD300C CD300H
GH17J074568 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -3.4 -3399 1.5 ZNF473 ZSCAN4 SIN3A ZNF195 YBX1 GLI4 EGR1 FOS EGR2 YY2 CD300E NAT9 CD300C NUP85 CD300LB NT5C ENSG00000266765 LINC02092 ENSG00000265927 ENSG00000265935
GH17J074581 Enhancer 0.2 FANTOM5 0.4 +8.3 8334 0.1 CD300LD RAB37 SLC9A3R1 C17orf77 PIR40961
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR40961 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR40961 Gene

Genomic Locations for PIR40961 Gene
chr17:74,572,955-74,572,982
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr17:36,284,547-36,284,574
(GRCh37/hg19)
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR40961 Gene

Genes around PIR40961 on UCSC Golden Path with GeneCards custom track

PIR40961 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR40961 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR40961 Gene

Function for PIR40961 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR40961 Gene

Localization for PIR40961 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR40961 Gene

Pathways & Interactions for PIR40961 Gene

SuperPathways for PIR40961 Gene

No Data Available

Interacting Proteins for PIR40961 Gene

Gene Ontology (GO) - Biological Process for PIR40961 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR40961 Gene

Drugs & Compounds for PIR40961 Gene

No Compound Related Data Available

Transcripts for PIR40961 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR40961 Gene

No ASD Table

Relevant External Links for PIR40961 Gene

GeneLoc Exon Structure for
PIR40961

No data available for mRNA/cDNA for PIR40961 Gene

Expression for PIR40961 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR40961 Gene

Orthologs for PIR40961 Gene

No data available for Orthologs and Evolution for PIR40961 Gene

Paralogs for PIR40961 Gene

No data available for Paralogs for PIR40961 Gene

Variants for PIR40961 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR40961 Gene

Disorders for PIR40961 Gene

No disorders were found for PIR40961 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR40961 Gene

Publications for PIR40961 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR40961 Gene

Sources for PIR40961 Gene

Content
Loading form....