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Aliases for PIR40674 Gene

Subcategory (RNA class) for PIR40674 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR40674 Gene

No Aliases found

ORGUL Members for PIR40674 Gene

Previous GeneCards Identifiers for PIR40674 Gene

  • GC0XP003062

No data available for External Ids for PIR40674 Gene

Summaries for PIR40674 Gene

GeneCards Summary for PIR40674 Gene

PIR40674 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR40674 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR40674 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR40674 Gene

Genomics for PIR40674 Gene

GeneHancer (GH) Regulatory Elements for PIR40674 Gene

Promoters and enhancers for PIR40674 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ003183 Enhancer 0.9 FANTOM5 Ensembl ENCODE 0.3 +40.5 40502 2.2 CEBPG CEBPA TCF7 FOXA2 TEAD1 FOXA3 PIR40674 LINC01546
GH0XJ003175 Enhancer 0.4 ENCODE 0.3 +32.4 32405 1.8 JUND CBFA2T3 PIR40674 LINC01546
GH0XJ003270 Promoter/Enhancer 0.9 Ensembl ENCODE 0.1 +127.6 127591 2.5 MAFK JUND JUN LINC01546 DHRSX-IT1 MXRA5 GC0XM003252 PIR40674
GH0XJ003262 Enhancer 0.7 Ensembl ENCODE 0.1 +119.3 119260 2.8 EGR1 RUNX3 FOS ZNF26 JUND JUN ATF2 MXRA5 LINC01546 GC0XM003252 PIR40674
GH0XJ003154 Enhancer 0.2 Ensembl 0.4 +10.7 10660 1.2 MXRA5 PIR40674 LINC01546
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR40674 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR40674 Gene

Genomic Locations for PIR40674 Gene
chrX:3,144,141-3,144,170
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chrX:3,062,182-3,062,211
(GRCh37/hg19)
Size:
30 bases
Orientation:
Plus strand

Genomic View for PIR40674 Gene

Genes around PIR40674 on UCSC Golden Path with GeneCards custom track

PIR40674 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR40674 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR40674 Gene

Proteins for PIR40674 Gene

Post-translational modifications for PIR40674 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR40674 Gene

Domains & Families for PIR40674 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR40674 Gene

Function for PIR40674 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR40674 Gene

Localization for PIR40674 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR40674 Gene

Pathways & Interactions for PIR40674 Gene

PathCards logo

SuperPathways for PIR40674 Gene

No Data Available

Interacting Proteins for PIR40674 Gene

Gene Ontology (GO) - Biological Process for PIR40674 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR40674 Gene

Drugs & Compounds for PIR40674 Gene

No Compound Related Data Available

Transcripts for PIR40674 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR40674 Gene

No ASD Table

Relevant External Links for PIR40674 Gene

GeneLoc Exon Structure for
PIR40674

No data available for mRNA/cDNA for PIR40674 Gene

Expression for PIR40674 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR40674 Gene

Orthologs for PIR40674 Gene

No data available for Orthologs and Evolution for PIR40674 Gene

Paralogs for PIR40674 Gene

No data available for Paralogs for PIR40674 Gene

Variants for PIR40674 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR40674 Gene

Disorders for PIR40674 Gene

No disorders were found for PIR40674 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR40674 Gene

Publications for PIR40674 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR40674 Gene

Products for PIR40674 Gene

Sources for PIR40674 Gene

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