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Aliases for PIR40651 Gene

Subcategory (RNA class) for PIR40651 Gene

piRNA

Quality Score for this RNA gene is

20

Aliases for PIR40651 Gene

No Aliases found

ORGUL Members for PIR40651 Gene

Previous GeneCards Identifiers for PIR40651 Gene

  • GC07P100473

No data available for External Ids for PIR40651 Gene

Summaries for PIR40651 Gene

GeneCards Summary for PIR40651 Gene

PIR40651 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR40651 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR40651 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR40651 Gene

Genomics for PIR40651 Gene

GeneHancer (GH) Regulatory Elements for PIR40651 Gene

Promoters and enhancers for PIR40651 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J100873 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 1000.6 -0.5 -511 3.4 MNT SP1 ZFX ELF3 SIX5 RERE GTF2F1 MLLT1 POLR2A ZNF687 SRRT PIR40651 ZNF3 TRIM4 GIGYF1 STAG3L5P PPP1R35 ACHE PCOLCE NYAP1
GH07J100876 Promoter/Enhancer 0.7 Ensembl ENCODE 1000.6 +1.4 1389 0.4 PIR40651 SRRT PIR45976
GH07J100879 Enhancer 0.5 Ensembl 0.6 +4.5 4524 0.8 CREB1 PKNOX1 ZNF341 POLR2A ZNF513 ZBTB33 MUC3A GIGYF1 PIR40651 PIR45976 SRRT
GH07J100884 Enhancer 0.5 ENCODE 0.4 +9.4 9360 0.2 ZNF600 GABPA POLR2A EGR2 PIR45976 MUC3A PIR40651 SRRT
GH07J100885 Enhancer 0.5 ENCODE 0.4 +10.2 10217 0 SP1 STAT5A HNF4A EGR2 PIR45976 PIR40651 SRRT
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR40651 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR40651 Gene

Genomic Locations for PIR40651 Gene
chr7:100,875,595-100,875,622
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr7:100,473,216-100,473,243
(GRCh37/hg19)
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR40651 Gene

Genes around PIR40651 on UCSC Golden Path with GeneCards custom track

PIR40651 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR40651 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR40651 Gene

Proteins for PIR40651 Gene

Post-translational modifications for PIR40651 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR40651 Gene

Domains & Families for PIR40651 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR40651 Gene

Function for PIR40651 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR40651 Gene

Localization for PIR40651 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR40651 Gene

Pathways & Interactions for PIR40651 Gene

PathCards logo

SuperPathways for PIR40651 Gene

No Data Available

Interacting Proteins for PIR40651 Gene

Gene Ontology (GO) - Biological Process for PIR40651 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR40651 Gene

Drugs & Compounds for PIR40651 Gene

No Compound Related Data Available

Transcripts for PIR40651 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR40651 Gene

No ASD Table

Relevant External Links for PIR40651 Gene

GeneLoc Exon Structure for
PIR40651

No data available for mRNA/cDNA for PIR40651 Gene

Expression for PIR40651 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR40651 Gene

Orthologs for PIR40651 Gene

No data available for Orthologs and Evolution for PIR40651 Gene

Paralogs for PIR40651 Gene

No data available for Paralogs for PIR40651 Gene

Variants for PIR40651 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR40651 Gene

Disorders for PIR40651 Gene

No disorders were found for PIR40651 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR40651 Gene

Publications for PIR40651 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR40651 Gene

Products for PIR40651 Gene

Sources for PIR40651 Gene

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