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Aliases for PIR40357 Gene

Subcategory (RNA class) for PIR40357 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR40357 Gene

No Aliases found

ORGUL Members for PIR40357 Gene

Previous GeneCards Identifiers for PIR40357 Gene

  • GC16P011076

No data available for External Ids for PIR40357 Gene

Summaries for PIR40357 Gene

GeneCards Summary for PIR40357 Gene

PIR40357 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR40357 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR40357 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR40357 Gene

Genomics for PIR40357 Gene

GeneHancer (GH) Regulatory Elements for PIR40357 Gene

Promoters and enhancers for PIR40357 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J010981 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 600.7 +0.2 227 3.6 CC2D1A CTCF ZNF687 AHR MAFK TFE3 RAD21 BACH1 ZNF143 REST PIR40357 CLEC16A GC16P011026 GC16P010485
GH16J010978 Enhancer 0.9 Ensembl ENCODE 0.7 -3.0 -2983 2.7 SP1 RXRA FOXA2 SOX13 SCRT2 RFX1 JUND ATF3 YY1 ZBTB33 PIR40357 CLEC16A GC16P010485
GH16J010971 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 -10.5 -10520 2.5 ZNF652 ELF3 CC2D1A CTCF ZKSCAN8 CBFA2T2 MLLT1 GTF2F1 NFIB TRIM24 PIR40357 CLEC16A GC16P010485
GH16J010990 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +9.5 9514 3.7 ZNF384 ZNF687 NFIB ZSCAN21 NCOA3 SP7 SMARCA4 FOSL2 IKZF1 PKNOX1 PRM3 ENSG00000212228 TNP2 PRM2 RMI2 PIR40357 GC16P011026 CLEC16A GC16P010485
GH16J010963 Enhancer 1.5 FANTOM5 Ensembl ENCODE 0.4 -17.8 -17812 3.5 SP1 CC2D1A ELF3 CTCF CBFA2T2 NKRF MLLT1 CEBPG ZNF687 TFE3 CIITA CLEC16A SOCS1 PIR40357 GC16P010485
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR40357 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR40357 Gene

Genomic Locations for PIR40357 Gene
chr16:10,982,932-10,982,958
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr16:11,076,789-11,076,815
(GRCh37/hg19)
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR40357 Gene

Genes around PIR40357 on UCSC Golden Path with GeneCards custom track

PIR40357 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR40357 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR40357 Gene

Proteins for PIR40357 Gene

Post-translational modifications for PIR40357 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR40357 Gene

Domains & Families for PIR40357 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR40357 Gene

Function for PIR40357 Gene

Phenotypes From GWAS Catalog for PIR40357 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR40357 Gene

Localization for PIR40357 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR40357 Gene

Pathways & Interactions for PIR40357 Gene

PathCards logo

SuperPathways for PIR40357 Gene

No Data Available

Interacting Proteins for PIR40357 Gene

Gene Ontology (GO) - Biological Process for PIR40357 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR40357 Gene

Drugs & Compounds for PIR40357 Gene

No Compound Related Data Available

Transcripts for PIR40357 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR40357 Gene

No ASD Table

Relevant External Links for PIR40357 Gene

GeneLoc Exon Structure for
PIR40357

No data available for mRNA/cDNA for PIR40357 Gene

Expression for PIR40357 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR40357 Gene

Orthologs for PIR40357 Gene

No data available for Orthologs and Evolution for PIR40357 Gene

Paralogs for PIR40357 Gene

No data available for Paralogs for PIR40357 Gene

Variants for PIR40357 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR40357 Gene

Disorders for PIR40357 Gene

No disorders were found for PIR40357 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR40357 Gene

Publications for PIR40357 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR40357 Gene

Products for PIR40357 Gene

Sources for PIR40357 Gene

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