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Aliases for PIR40268 Gene

Subcategory (RNA class) for PIR40268 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR40268 Gene

No Aliases found

ORGUL Members for PIR40268 Gene

Previous GeneCards Identifiers for PIR40268 Gene

  • GC10M043140

No data available for External Ids for PIR40268 Gene

Summaries for PIR40268 Gene

GeneCards Summary for PIR40268 Gene

PIR40268 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR40268 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR40268 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR40268 Gene

Genomics for PIR40268 Gene

GeneHancer (GH) Regulatory Elements for PIR40268 Gene

Promoters and enhancers for PIR40268 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J042643 Enhancer 1.3 Ensembl ENCODE dbSUPER 600.7 -1.2 -1168 3.9 CC2D1A ZKSCAN8 CBFA2T2 ZNF148 MLLT1 GTF2F1 NCOA6 TRIM24 EGR1 ZNF639 PIR40268 LINC00839 ZNF33B ZNF239 LOC105378268 PIR60642 ENSG00000285884
GH10J042650 Enhancer 0.4 Ensembl 0.4 -5.9 -5927 0.8 ETV6 EHMT2 ZBTB40 PIR60642 PIR40268
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR40268 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR40268 Gene

Genomic Locations for PIR40268 Gene
chr10:42,644,648-42,644,674
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr10:43,140,096-43,140,122
(GRCh37/hg19)
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR40268 Gene

Genes around PIR40268 on UCSC Golden Path with GeneCards custom track

PIR40268 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR40268 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR40268 Gene

Proteins for PIR40268 Gene

Post-translational modifications for PIR40268 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR40268 Gene

Domains & Families for PIR40268 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR40268 Gene

Function for PIR40268 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR40268 Gene

Localization for PIR40268 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR40268 Gene

Pathways & Interactions for PIR40268 Gene

PathCards logo

SuperPathways for PIR40268 Gene

No Data Available

Interacting Proteins for PIR40268 Gene

Gene Ontology (GO) - Biological Process for PIR40268 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR40268 Gene

Drugs & Compounds for PIR40268 Gene

No Compound Related Data Available

Transcripts for PIR40268 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR40268 Gene

No ASD Table

Relevant External Links for PIR40268 Gene

GeneLoc Exon Structure for
PIR40268

No data available for mRNA/cDNA for PIR40268 Gene

Expression for PIR40268 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR40268 Gene

Orthologs for PIR40268 Gene

No data available for Orthologs and Evolution for PIR40268 Gene

Paralogs for PIR40268 Gene

No data available for Paralogs for PIR40268 Gene

Variants for PIR40268 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR40268 Gene

Disorders for PIR40268 Gene

No disorders were found for PIR40268 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR40268 Gene

Publications for PIR40268 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR40268 Gene

Products for PIR40268 Gene

Sources for PIR40268 Gene

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