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Aliases for PIR40127 Gene

Subcategory (RNA class) for PIR40127 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR40127 Gene

No Aliases found

ORGUL Members for PIR40127 Gene

Previous GeneCards Identifiers for PIR40127 Gene

  • GC04M000766
  • GC04M000767
  • GC04M000772
  • GC04M000776

No data available for External Ids for PIR40127 Gene

Summaries for PIR40127 Gene

GeneCards Summary for PIR40127 Gene

PIR40127 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR40127 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR40127 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR40127 Gene

Genomics for PIR40127 Gene

GeneHancer (GH) Regulatory Elements for PIR40127 Gene

Promoters and enhancers for PIR40127 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I000771 Enhancer 0.4 dbSUPER 550.8 -1.3 -1346 1 POLR2A SUPT5H PIR40127 PCGF3 LOC100129917
GH04I000769 Enhancer 0.3 ENCODE 550.8 +1.2 1176 0.2 POLR2A PIR40127 PCGF3 DGKQ IDUA SLC26A1 ENSG00000233799 LOC100129917
GH04I000765 Enhancer 1 ENCODE dbSUPER 0.8 +3.8 3789 2.1 CTCF ZEB1 CCNT2 ZNF316 GLIS2 POLR2A SCRT2 PRDM10 FOS ZNF600 ENSG00000233799 PCGF3 CRIPAK ENSG00000248416 PIR40127 LOC100129917
GH04I000772 Enhancer 0.3 dbSUPER 0.8 -2.8 -2789 1.1 ZBTB8A PCGF3 PIR40127 LOC100129917
GH04I000776 Enhancer 0.3 FANTOM5 0.4 -6.2 -6245 0.4 ZNF146 PCGF3 DGKQ ZNF141 PIR40127 LOC100129917
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR40127 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR40127 Gene

Genomic Locations for PIR40127 Gene
chr4:770,320-770,347
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr4:764,108-764,135
(GRCh37/hg19)

Genomic View for PIR40127 Gene

Genes around PIR40127 on UCSC Golden Path with GeneCards custom track

PIR40127 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR40127 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR40127 Gene

Proteins for PIR40127 Gene

Post-translational modifications for PIR40127 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR40127 Gene

Domains & Families for PIR40127 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR40127 Gene

Function for PIR40127 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR40127 Gene

Localization for PIR40127 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR40127 Gene

Pathways & Interactions for PIR40127 Gene

SuperPathways for PIR40127 Gene

No Data Available

Interacting Proteins for PIR40127 Gene

Gene Ontology (GO) - Biological Process for PIR40127 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR40127 Gene

Drugs & Compounds for PIR40127 Gene

No Compound Related Data Available

Transcripts for PIR40127 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR40127 Gene

No ASD Table

Relevant External Links for PIR40127 Gene

GeneLoc Exon Structure for
PIR40127

No data available for mRNA/cDNA for PIR40127 Gene

Expression for PIR40127 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR40127 Gene

Orthologs for PIR40127 Gene

No data available for Orthologs and Evolution for PIR40127 Gene

Paralogs for PIR40127 Gene

No data available for Paralogs for PIR40127 Gene

Variants for PIR40127 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR40127 Gene

Disorders for PIR40127 Gene

No disorders were found for PIR40127 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR40127 Gene

Publications for PIR40127 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR40127 Gene

Sources for PIR40127 Gene

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