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Aliases for PIR39750 Gene

Subcategory (RNA class) for PIR39750 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR39750 Gene

No Aliases found

ORGUL Members for PIR39750 Gene

Previous GeneCards Identifiers for PIR39750 Gene

  • GC15P073596

No data available for External Ids for PIR39750 Gene

Summaries for PIR39750 Gene

GeneCards Summary for PIR39750 Gene

PIR39750 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR39750 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR39750 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR39750 Gene

Genomics for PIR39750 Gene

GeneHancer (GH) Regulatory Elements for PIR39750 Gene

Promoters and enhancers for PIR39750 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J073306 Enhancer 0.6 ENCODE 650.7 +1.5 1549 0.2 CTCF ZNF654 YY2 REST FEZF1 ZNF2 RAD21 ZNF217 XRCC5 GATA3 PIR39750 PIR60762
GH15J073307 Enhancer 0.6 ENCODE 650.7 +1.7 1712 0 CTCF RAD21 ZNF2 ZNF217 GATA3 XRCC5 ZNF692 ZNF143 ZNF444 DEK PIR39750 PIR60762
GH15J073303 Enhancer 0.2 Ensembl 650.7 -0.2 -245 1 PIR39750 ENSG00000259528 NEO1
GH15J073318 Enhancer 0.8 FANTOM5 ENCODE 0.4 +14.4 14360 0.4 MXI1 RFX1 MAX SIN3A EBF1 MEF2B BMI1 POLR2A GLIS1 MYNN REC114 NEO1 HCN4 PIR60762 PIR39750
GH15J073293 Enhancer 0.8 ENCODE 0.4 -10.7 -10703 1.2 FOXA2 MLX RARA ZNF614 MIXL1 NFKBIZ RXRA ZBTB25 REST KAT8 HCN4 PIR39750 ENSG00000259528 NEO1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR39750 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR39750 Gene

Genomic Locations for PIR39750 Gene
chr15:73,304,546-73,304,573
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr15:73,596,887-73,596,914
(GRCh37/hg19)
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR39750 Gene

Genes around PIR39750 on UCSC Golden Path with GeneCards custom track

PIR39750 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR39750 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR39750 Gene

Function for PIR39750 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR39750 Gene

Localization for PIR39750 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR39750 Gene

Pathways & Interactions for PIR39750 Gene

SuperPathways for PIR39750 Gene

No Data Available

Interacting Proteins for PIR39750 Gene

Gene Ontology (GO) - Biological Process for PIR39750 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR39750 Gene

Drugs & Compounds for PIR39750 Gene

No Compound Related Data Available

Transcripts for PIR39750 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR39750 Gene

No ASD Table

Relevant External Links for PIR39750 Gene

GeneLoc Exon Structure for
PIR39750

No data available for mRNA/cDNA for PIR39750 Gene

Expression for PIR39750 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR39750 Gene

Orthologs for PIR39750 Gene

No data available for Orthologs and Evolution for PIR39750 Gene

Paralogs for PIR39750 Gene

No data available for Paralogs for PIR39750 Gene

Variants for PIR39750 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR39750 Gene

Disorders for PIR39750 Gene

No disorders were found for PIR39750 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR39750 Gene

Publications for PIR39750 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR39750 Gene

Sources for PIR39750 Gene

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