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Aliases for PIR39704 Gene

Subcategory (RNA class) for PIR39704 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR39704 Gene

No Aliases found

ORGUL Members for PIR39704 Gene

Previous GeneCards Identifiers for PIR39704 Gene

  • GC06M090708

No data available for External Ids for PIR39704 Gene

Summaries for PIR39704 Gene

GeneCards Summary for PIR39704 Gene

PIR39704 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR39704 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR39704 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR39704 Gene

Genomics for PIR39704 Gene

GeneHancer (GH) Regulatory Elements for PIR39704 Gene

Promoters and enhancers for PIR39704 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J089997 Enhancer 1.3 Ensembl ENCODE dbSUPER 650.7 +0.2 238 3.1 PKNOX1 SMAD1 INSM2 KLF17 MZF1 FEZF1 ZNF2 ZNF766 ZNF366 ZSCAN5C PIR39704 LOC644269 PM20D2 GC06P089977 BACH2
GH06J090000 Enhancer 0.6 ENCODE dbSUPER 650.7 -1.5 -1541 0.2 PRDM6 MZF1 PIR39704 RN7SKP110 BACH2
GH06J089984 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +12.1 12147 4.1 MEIS2 MZF1 ZEB2 ZFHX2 ZNF366 POLR2A RCOR1 PRDM10 CHD2 TRIM28 ENSG00000226455 BACH2 GC06P089977 PIR39704
GH06J089988 Enhancer 0.4 ENCODE dbSUPER 0.4 +8.9 8877 2.2 LOC644269 MDN1 PIR39704 GC06P089977 BACH2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR39704 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR39704 Gene

Genomic Locations for PIR39704 Gene
chr6:89,998,808-89,998,836
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr6:90,708,527-90,708,555
(GRCh37/hg19)
Size:
29 bases
Orientation:
Minus strand

Genomic View for PIR39704 Gene

Genes around PIR39704 on UCSC Golden Path with GeneCards custom track

PIR39704 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR39704 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR39704 Gene

Function for PIR39704 Gene

Phenotypes From GWAS Catalog for PIR39704 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR39704 Gene

Localization for PIR39704 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR39704 Gene

Pathways & Interactions for PIR39704 Gene

SuperPathways for PIR39704 Gene

No Data Available

Interacting Proteins for PIR39704 Gene

Gene Ontology (GO) - Biological Process for PIR39704 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR39704 Gene

Drugs & Compounds for PIR39704 Gene

No Compound Related Data Available

Transcripts for PIR39704 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR39704 Gene

No ASD Table

Relevant External Links for PIR39704 Gene

GeneLoc Exon Structure for
PIR39704

No data available for mRNA/cDNA for PIR39704 Gene

Expression for PIR39704 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR39704 Gene

Orthologs for PIR39704 Gene

No data available for Orthologs and Evolution for PIR39704 Gene

Paralogs for PIR39704 Gene

No data available for Paralogs for PIR39704 Gene

Variants for PIR39704 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR39704 Gene

Disorders for PIR39704 Gene

No disorders were found for PIR39704 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR39704 Gene

Publications for PIR39704 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR39704 Gene

Sources for PIR39704 Gene

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