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Aliases for PIR39697 Gene

Subcategory (RNA class) for PIR39697 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR39697 Gene

No Aliases found

ORGUL Members for PIR39697 Gene

Previous GeneCards Identifiers for PIR39697 Gene

  • GC01M179594
  • GC01M179671
  • GC01M179885
  • GC01M179977
  • GC01M180129
  • GC01M179755
  • GC01M179837
  • GC01M180938
  • GC01M180134
  • GC01M180299
  • GC01M180397
  • GC01M180496
  • GC01M180585
  • GC01M180678
  • GC01M180773
  • GC01M180865

No data available for External Ids for PIR39697 Gene

Summaries for PIR39697 Gene

GeneCards Summary for PIR39697 Gene

PIR39697 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR39697 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR39697

Additional gene information for PIR39697 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR39697 Gene

Genomics for PIR39697 Gene

GeneHancer (GH) Regulatory Elements for PIR39697 Gene

Promoters and enhancers for PIR39697 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J179591 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 600.7 -2.0 -1986 0.7 MYC CREB1 NRF1 TARDBP CTCF CTBP1 GTF2F1 ZFX ZNF512B MGA TDRD5 GC01M181073 GC01M181088 GC01M181116 GC01M181151 PIR49990 PIR39697 PIR53531 PIR48368 PIR60231
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR39697 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR39697 Gene

Genomic Locations for PIR39697 Gene
chr1:179,589,855-179,589,885
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand
chr1:179,558,990-179,559,020
(GRCh37/hg19)
Size:
31 bases
Orientation:
Minus strand

Genomic View for PIR39697 Gene

Genes around PIR39697 on UCSC Golden Path with GeneCards custom track

PIR39697 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR39697 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR39697 Gene

ORGUL Member Location for PIR39697 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR39697 Gene

Proteins for PIR39697 Gene

Post-translational modifications for PIR39697 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR39697 Gene

Domains & Families for PIR39697 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR39697 Gene

Function for PIR39697 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR39697 Gene

Localization for PIR39697 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR39697 Gene

Pathways & Interactions for PIR39697 Gene

PathCards logo

SuperPathways for PIR39697 Gene

No Data Available

Interacting Proteins for PIR39697 Gene

Gene Ontology (GO) - Biological Process for PIR39697 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR39697 Gene

Drugs & Compounds for PIR39697 Gene

No Compound Related Data Available

Transcripts for PIR39697 Gene

fRNAdb Secondary structures for PIR39697 Gene

  • FR323866

Alternative Splicing Database (ASD) splice patterns (SP) for PIR39697 Gene

No ASD Table

Relevant External Links for PIR39697 Gene

GeneLoc Exon Structure for
PIR39697

No data available for mRNA/cDNA for PIR39697 Gene

Expression for PIR39697 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR39697 Gene

Orthologs for PIR39697 Gene

No data available for Orthologs and Evolution for PIR39697 Gene

Paralogs for PIR39697 Gene

No data available for Paralogs for PIR39697 Gene

Variants for PIR39697 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR39697 Gene

Disorders for PIR39697 Gene

No disorders were found for PIR39697 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR39697 Gene

Publications for PIR39697 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR39697 Gene

Products for PIR39697 Gene

Sources for PIR39697 Gene

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