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Aliases for PIR38866 Gene

Subcategory (RNA class) for PIR38866 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR38866 Gene

No Aliases found

ORGUL Members for PIR38866 Gene

Previous GeneCards Identifiers for PIR38866 Gene

  • GC09P136237
  • GC09P136239
  • GC09P136250
  • GC09P136265
  • GC09P136287
  • GC09P133370
  • GC09P133379
  • GC09P133383
  • GC09P133391
  • GC09P133400
  • GC09P133410
  • GC09P133421
  • GC09P133430

No data available for External Ids for PIR38866 Gene

Summaries for PIR38866 Gene

GeneCards Summary for PIR38866 Gene

PIR38866 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR38866 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR38866 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR38866 Gene

Genomics for PIR38866 Gene

GeneHancer (GH) Regulatory Elements for PIR38866 Gene

Promoters and enhancers for PIR38866 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J133367 Enhancer 1.2 Ensembl ENCODE dbSUPER 650.7 +0.5 479 6 FOXA2 INSM2 YY1 SCRT2 RUNX3 EGR2 SMAD5 RXRA CEBPB REST PIR38866 PIR60170 SURF6 SURF1 ADAMTS13 RPL7A SNORD36B SNORD24 MED22 ENSG00000201451
GH09J133359 Enhancer 0.9 ENCODE dbSUPER 0.4 -10.4 -10416 0.2 CTCF RB1 SAP130 ARID4B SIN3A ZNF48 RAD21 POLR2A SMC3 RBM22 ENSG00000201451 ENSG00000230064 SURF6 ADAMTS13 MYMK ADAMTSL2 SURF1 SURF2 PIR38866
GH09J133360 Enhancer 0.8 ENCODE dbSUPER 0.4 -9.0 -9020 0.9 PAF1 PKNOX1 SP5 THRB ZFHX2 EGR1 POLR2A NFATC1 MYNN ZBTB33 SURF1 ADAMTS13 SURF6 ENSG00000201451 ENSG00000230064 MYMK ADAMTSL2 SURF2 PIR38866
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR38866 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR38866 Gene

Genomic Locations for PIR38866 Gene
chr9:133,369,896-133,369,922
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr9:136,236,772-136,236,798
(GRCh37/hg19)
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR38866 Gene

Genes around PIR38866 on UCSC Golden Path with GeneCards custom track

PIR38866 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR38866 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR38866 Gene

Function for PIR38866 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR38866 Gene

Localization for PIR38866 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR38866 Gene

Pathways & Interactions for PIR38866 Gene

SuperPathways for PIR38866 Gene

No Data Available

Interacting Proteins for PIR38866 Gene

Gene Ontology (GO) - Biological Process for PIR38866 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR38866 Gene

Drugs & Compounds for PIR38866 Gene

No Compound Related Data Available

Transcripts for PIR38866 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR38866 Gene

No ASD Table

Relevant External Links for PIR38866 Gene

GeneLoc Exon Structure for
PIR38866

No data available for mRNA/cDNA for PIR38866 Gene

Expression for PIR38866 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR38866 Gene

Orthologs for PIR38866 Gene

No data available for Orthologs and Evolution for PIR38866 Gene

Paralogs for PIR38866 Gene

No data available for Paralogs for PIR38866 Gene

Variants for PIR38866 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR38866 Gene

Disorders for PIR38866 Gene

No disorders were found for PIR38866 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR38866 Gene

Publications for PIR38866 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR38866 Gene

Sources for PIR38866 Gene

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