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Aliases for PIR38309 Gene

Subcategory (RNA class) for PIR38309 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR38309 Gene

No Aliases found

ORGUL Members for PIR38309 Gene

Previous GeneCards Identifiers for PIR38309 Gene

  • GC10M068918

No data available for External Ids for PIR38309 Gene

Summaries for PIR38309 Gene

GeneCards Summary for PIR38309 Gene

PIR38309 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR38309 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR38309 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR38309 Gene

Genomics for PIR38309 Gene

GeneHancer (GH) Regulatory Elements for PIR38309 Gene

Promoters and enhancers for PIR38309 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J067115 Enhancer 0.7 ENCODE 0.3 +44.1 44128 0.2 NCOA3 CLOCK FOXA2 MAX ZNF644 RAD21 YY1 CTBP1 GATA3 FOS GC10P067108 PIR38309 CTNNA3
GH10J067230 Enhancer 0.8 Ensembl ENCODE 0.2 -71.6 -71624 1.1 ZBTB10 KLF1 FOXA2 RXRA MAX REST FOXA1 SP1 ZBTB48 CEBPA PIR38309 RPL7AP51 CTNNA3
GH10J067240 Enhancer 0.7 ENCODE 0.2 -82.3 -82338 2.5 ELF3 SOX13 FOXA2 ZNF644 RAD21 YY1 ETS1 HNF4G GATAD2A HMG20B ATOH7 PIR38309 RPL7AP51 CTNNA3
GH10J067259 Enhancer 0.6 ENCODE 0.1 -100.2 -100232 0.1 PKNOX1 SP3 RXRA ZNF384 FEZF1 RAD21 HIC1 SP1 BCL11A ZSCAN16 RPL7AP51 PIR38309 CTNNA3
GH10J067330 Enhancer 0.2 ENCODE 0.1 -171.9 -171882 1.1 RPL7AP51 PIR38309 CTNNA3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR38309 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR38309 Gene

Genomic Locations for PIR38309 Gene
chr10:67,159,217-67,159,246
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr10:68,918,975-68,919,004
(GRCh37/hg19)
Size:
30 bases
Orientation:
Minus strand

Genomic View for PIR38309 Gene

Genes around PIR38309 on UCSC Golden Path with GeneCards custom track

PIR38309 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR38309 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR38309 Gene

Function for PIR38309 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR38309 Gene

Localization for PIR38309 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR38309 Gene

Pathways & Interactions for PIR38309 Gene

SuperPathways for PIR38309 Gene

No Data Available

Interacting Proteins for PIR38309 Gene

Gene Ontology (GO) - Biological Process for PIR38309 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR38309 Gene

Drugs & Compounds for PIR38309 Gene

No Compound Related Data Available

Transcripts for PIR38309 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR38309 Gene

No ASD Table

Relevant External Links for PIR38309 Gene

GeneLoc Exon Structure for
PIR38309

No data available for mRNA/cDNA for PIR38309 Gene

Expression for PIR38309 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR38309 Gene

Orthologs for PIR38309 Gene

No data available for Orthologs and Evolution for PIR38309 Gene

Paralogs for PIR38309 Gene

No data available for Paralogs for PIR38309 Gene

Variants for PIR38309 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR38309 Gene

Disorders for PIR38309 Gene

No disorders were found for PIR38309 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR38309 Gene

Publications for PIR38309 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR38309 Gene

Sources for PIR38309 Gene

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