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Aliases for PIR38297 Gene

Subcategory (RNA class) for PIR38297 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR38297 Gene

No Aliases found

ORGUL Members for PIR38297 Gene

Previous GeneCards Identifiers for PIR38297 Gene

  • GC16M002734
  • GC16M002738
  • GC16M002741
  • GC16M002745
  • GC16M002748

No data available for External Ids for PIR38297 Gene

Summaries for PIR38297 Gene

GeneCards Summary for PIR38297 Gene

PIR38297 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR38297 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR38297 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR38297 Gene

Genomics for PIR38297 Gene

GeneHancer (GH) Regulatory Elements for PIR38297 Gene

Promoters and enhancers for PIR38297 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J002679 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 600.7 +1.2 1212 5.3 MTA3 ZNF652 ZFX SP1 ELF3 MNT SIX5 NKRF POLR2A MLLT1 PIR38297 PIR43814 PIR61225 KCTD5 ENSG00000279901 ABCA3 TBL3 ENSG00000261613 ZNF597 E4F1
GH16J002686 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -3.9 -3918 1.8 SP1 NKRF MLLT1 IKZF1 POLR2A IKZF2 RELA TRIM22 DPF2 EED ENSG00000261613 KCTD5 ERVK13-1 PIR38297 GC16M002686
GH16J002685 Promoter/Enhancer 0.7 Ensembl dbSUPER 0.7 -2.3 -2338 1 PIR38297 KCTD5 GC16M002686
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR38297 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR38297 Gene

Genomic Locations for PIR38297 Gene
chr16:2,683,337-2,683,363
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr16:2,733,338-2,733,364
(GRCh37/hg19)
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR38297 Gene

Genes around PIR38297 on UCSC Golden Path with GeneCards custom track

PIR38297 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR38297 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR38297 Gene

Proteins for PIR38297 Gene

Post-translational modifications for PIR38297 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR38297 Gene

Domains & Families for PIR38297 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR38297 Gene

Function for PIR38297 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR38297 Gene

Localization for PIR38297 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR38297 Gene

Pathways & Interactions for PIR38297 Gene

PathCards logo

SuperPathways for PIR38297 Gene

No Data Available

Interacting Proteins for PIR38297 Gene

Gene Ontology (GO) - Biological Process for PIR38297 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR38297 Gene

Drugs & Compounds for PIR38297 Gene

No Compound Related Data Available

Transcripts for PIR38297 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR38297 Gene

No ASD Table

Relevant External Links for PIR38297 Gene

GeneLoc Exon Structure for
PIR38297

No data available for mRNA/cDNA for PIR38297 Gene

Expression for PIR38297 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR38297 Gene

Orthologs for PIR38297 Gene

No data available for Orthologs and Evolution for PIR38297 Gene

Paralogs for PIR38297 Gene

No data available for Paralogs for PIR38297 Gene

Variants for PIR38297 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR38297 Gene

Disorders for PIR38297 Gene

No disorders were found for PIR38297 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR38297 Gene

Publications for PIR38297 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR38297 Gene

Products for PIR38297 Gene

Sources for PIR38297 Gene

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