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Aliases for PIR38247 Gene

Subcategory (RNA class) for PIR38247 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR38247 Gene

No Aliases found

ORGUL Members for PIR38247 Gene

Previous GeneCards Identifiers for PIR38247 Gene

  • GC10P076939

No data available for External Ids for PIR38247 Gene

Summaries for PIR38247 Gene

GeneCards Summary for PIR38247 Gene

PIR38247 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR38247 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR38247 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR38247 Gene

Genomics for PIR38247 Gene

GeneHancer (GH) Regulatory Elements for PIR38247 Gene

Promoters and enhancers for PIR38247 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J075179 Enhancer 0.8 Ensembl ENCODE 600.7 +0.6 609 1.6 MAFK PRDM10 ZNF316 JUND MAFG JUN MAFF HLF EMSY PIR38247 DUPD1 PPIAP13 VDAC2 GC10P075147 SAMD8
GH10J075207 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.3 +29.9 29921 6 MTA3 SP1 ZFX ELF3 ZKSCAN8 MNT ZNF148 NKRF POLR2A MLLT1 VDAC2 KAT6B ZNF503-AS1 COMTD1 PIR38247
GH10J075191 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 +13.0 13012 7.9 CC2D1A CBFA2T2 MLLT1 ZNF121 CEBPG BACH1 MAFK TRIM24 SP1 PPARG DUSP13 ZNF503-AS1 COMTD1 PPIAP13 PIR38247 VDAC2 GC10P075147
GH10J075186 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +7.4 7357 3 CC2D1A CTCF CEBPG SP1 PPARG ZNF384 ZNF644 RAD21 RXRA CEBPA ZNF503-AS1 PPIAP13 DUSP13 COMTD1 PIR38247 VDAC2 GC10P075147
GH10J075165 Enhancer 1.1 Ensembl ENCODE 0.4 -12.7 -12743 4 SP1 ELF3 CEBPG RERE HNF1A PPARG SP5 CREM PRDM1 MLLT1 ZNF503-AS1 DUSP13 PPIAP13 HMGA1P5 COMTD1 PIR38247 PIR60449 GC10P075147 SAMD8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR38247 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR38247 Gene

Genomic Locations for PIR38247 Gene
chr10:75,180,144-75,180,170
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr10:76,939,902-76,939,928
(GRCh37/hg19)
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR38247 Gene

Genes around PIR38247 on UCSC Golden Path with GeneCards custom track

PIR38247 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR38247 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR38247 Gene

Proteins for PIR38247 Gene

Post-translational modifications for PIR38247 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR38247 Gene

Domains & Families for PIR38247 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR38247 Gene

Function for PIR38247 Gene

Phenotypes From GWAS Catalog for PIR38247 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR38247 Gene

Localization for PIR38247 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR38247 Gene

Pathways & Interactions for PIR38247 Gene

PathCards logo

SuperPathways for PIR38247 Gene

No Data Available

Interacting Proteins for PIR38247 Gene

Gene Ontology (GO) - Biological Process for PIR38247 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR38247 Gene

Drugs & Compounds for PIR38247 Gene

No Compound Related Data Available

Transcripts for PIR38247 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR38247 Gene

No ASD Table

Relevant External Links for PIR38247 Gene

GeneLoc Exon Structure for
PIR38247

No data available for mRNA/cDNA for PIR38247 Gene

Expression for PIR38247 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR38247 Gene

Orthologs for PIR38247 Gene

No data available for Orthologs and Evolution for PIR38247 Gene

Paralogs for PIR38247 Gene

No data available for Paralogs for PIR38247 Gene

Variants for PIR38247 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR38247 Gene

Disorders for PIR38247 Gene

No disorders were found for PIR38247 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR38247 Gene

Publications for PIR38247 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR38247 Gene

Products for PIR38247 Gene

Sources for PIR38247 Gene

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