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Aliases for PIR37989 Gene

Subcategory (RNA class) for PIR37989 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR37989 Gene

No Aliases found

ORGUL Members for PIR37989 Gene

Previous GeneCards Identifiers for PIR37989 Gene

  • GC19P004401

No data available for External Ids for PIR37989 Gene

Summaries for PIR37989 Gene

GeneCards Summary for PIR37989 Gene

PIR37989 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR37989 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR37989 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR37989 Gene

Genomics for PIR37989 Gene

GeneHancer (GH) Regulatory Elements for PIR37989 Gene

Promoters and enhancers for PIR37989 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I004398 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 550.8 +1.2 1245 6.8 MLX YBX1 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 CHAF1A SH3GL1 PIR37989 ENSG00000267769 CACTIN-AS1 UBXN6 ENSG00000267030 PTPRS APBA3 DPP9-AS1
GH19I004396 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.8 -3.2 -3151 1.1 ZNF10 HNF4A CHAF1A UBXN6 PIR37989 SH3GL1 ENSG00000267980
GH19I004388 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 -8.6 -8620 7.3 PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 ZNF48 ETS1 YY1 SLC30A9 ENSG00000267769 CHAF1A UBXN6 SH3GL1 ENSG00000267980 PIR37989
GH19I004367 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -25.5 -25508 14.8 MLX DMAP1 IRF4 E2F8 ZNF143 MEF2D SSRP1 GLIS1 RCOR2 NBN ENSG00000267769 SEMA6B CHAF1A CACTIN SH3GL1 UBXN6 CCDC94 CACTIN-AS1 ENSG00000267030 FSD1
GH19I004385 Enhancer 0.9 ENCODE dbSUPER 0.4 -14.6 -14598 2.4 SAP130 MLX ARID4B ZNF384 CEBPG ZIC2 ZNF121 ZFHX2 ZNF316 POLR2A CHAF1A ENSG00000267980 PIR37989 SH3GL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR37989 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR37989 Gene

Genomic Locations for PIR37989 Gene
chr19:4,400,328-4,400,355
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr19:4,400,325-4,400,352
(GRCh37/hg19)

Genomic View for PIR37989 Gene

Genes around PIR37989 on UCSC Golden Path with GeneCards custom track

PIR37989 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR37989 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR37989 Gene

Proteins for PIR37989 Gene

Post-translational modifications for PIR37989 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR37989 Gene

Domains & Families for PIR37989 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR37989 Gene

Function for PIR37989 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR37989 Gene

Localization for PIR37989 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR37989 Gene

Pathways & Interactions for PIR37989 Gene

SuperPathways for PIR37989 Gene

No Data Available

Interacting Proteins for PIR37989 Gene

Gene Ontology (GO) - Biological Process for PIR37989 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR37989 Gene

Drugs & Compounds for PIR37989 Gene

No Compound Related Data Available

Transcripts for PIR37989 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR37989 Gene

No ASD Table

Relevant External Links for PIR37989 Gene

GeneLoc Exon Structure for
PIR37989

No data available for mRNA/cDNA for PIR37989 Gene

Expression for PIR37989 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR37989 Gene

Orthologs for PIR37989 Gene

No data available for Orthologs and Evolution for PIR37989 Gene

Paralogs for PIR37989 Gene

No data available for Paralogs for PIR37989 Gene

Variants for PIR37989 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR37989 Gene

Disorders for PIR37989 Gene

No disorders were found for PIR37989 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR37989 Gene

Publications for PIR37989 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR37989 Gene

Sources for PIR37989 Gene

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