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Aliases for PIR37678 Gene

Subcategory (RNA class) for PIR37678 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR37678 Gene

No Aliases found

ORGUL Members for PIR37678 Gene

Previous GeneCards Identifiers for PIR37678 Gene

  • GC04M110317

No data available for External Ids for PIR37678 Gene

Summaries for PIR37678 Gene

GeneCards Summary for PIR37678 Gene

PIR37678 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR37678 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR37678 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR37678 Gene

Genomics for PIR37678 Gene

GeneHancer (GH) Regulatory Elements for PIR37678 Gene

Promoters and enhancers for PIR37678 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I109399 Enhancer 0.4 FANTOM5 0.8 -3.4 -3368 0.3 ZFHX2 EGR2 LRIT3 PIR37678 SEC24B SEC24B-AS1
GH04I109422 Enhancer 1 Ensembl ENCODE 0.3 -26.8 -26762 0.6 HDGF PKNOX1 ATF1 ZNF2 RAD21 ARID2 ZNF143 CREM MIXL1 DEK SEC24B CDC42P4 SETP20 CASP6 GAR1 OSTC PLA2G12A LRIT3 SEC24B-AS1 PIR37678
GH04I109386 Enhancer 0.5 ENCODE 0.4 +8.9 8919 0.2 PKNOX1 ATF1 POU5F1 MNT CREM MGA YY1 SEC24B-AS1 PIR37678 GC04P109364
GH04I109411 Enhancer 0.5 ENCODE 0.4 -16.7 -16708 1.3 NFIC NFIA NFIB NFE2 ZIC2 ZNF2 PRDM4 RBMXP4 PIR37678 SEC24B SEC24B-AS1
GH04I109419 Enhancer 0.6 ENCODE 0.3 -23.8 -23840 1.3 TEAD4 HLF TAL1 CBFA2T3 OSR2 TCF12 SCRT2 GLIS1 CBFA2T2 EZH2 CFI RBMXP4 SEC24B SEC24B-AS1 PIR37678
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR37678 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR37678 Gene

Genomic Locations for PIR37678 Gene
chr4:109,395,901-109,395,929
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr4:110,317,057-110,317,085
(GRCh37/hg19)

Genomic View for PIR37678 Gene

Genes around PIR37678 on UCSC Golden Path with GeneCards custom track

PIR37678 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR37678 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR37678 Gene

Proteins for PIR37678 Gene

Post-translational modifications for PIR37678 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR37678 Gene

Domains & Families for PIR37678 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR37678 Gene

Function for PIR37678 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR37678 Gene

Localization for PIR37678 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR37678 Gene

Pathways & Interactions for PIR37678 Gene

SuperPathways for PIR37678 Gene

No Data Available

Interacting Proteins for PIR37678 Gene

Gene Ontology (GO) - Biological Process for PIR37678 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR37678 Gene

Drugs & Compounds for PIR37678 Gene

No Compound Related Data Available

Transcripts for PIR37678 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR37678 Gene

No ASD Table

Relevant External Links for PIR37678 Gene

GeneLoc Exon Structure for
PIR37678

No data available for mRNA/cDNA for PIR37678 Gene

Expression for PIR37678 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR37678 Gene

Orthologs for PIR37678 Gene

No data available for Orthologs and Evolution for PIR37678 Gene

Paralogs for PIR37678 Gene

No data available for Paralogs for PIR37678 Gene

Variants for PIR37678 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR37678 Gene

Disorders for PIR37678 Gene

No disorders were found for PIR37678 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR37678 Gene

Publications for PIR37678 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR37678 Gene

Sources for PIR37678 Gene

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