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Aliases for PIR37538 Gene

Subcategory (RNA class) for PIR37538 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR37538 Gene

No Aliases found

ORGUL Members for PIR37538 Gene

Previous GeneCards Identifiers for PIR37538 Gene

  • GC17P057416

No data available for External Ids for PIR37538 Gene

Summaries for PIR37538 Gene

GeneCards Summary for PIR37538 Gene

PIR37538 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR37538 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR37538 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR37538 Gene

Genomics for PIR37538 Gene

GeneHancer (GH) Regulatory Elements for PIR37538 Gene

Promoters and enhancers for PIR37538 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J059335 Enhancer 0.5 dbSUPER 650.7 -0.9 -882 5 SREBF1 SUZ12 TARDBP HNF4A ZFX PIR37538 SMG8 TEX14 YPEL2
GH17J059347 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +9.3 9310 1.5 SIN3A YBX1 NFXL1 ZNF366 ZSCAN5C SMARCA5 GATAD2B SP1 ZNF217 MTA1 PIR37538 ENSG00000278863 YPEL2
GH17J059341 Enhancer 0.6 dbSUPER 0.7 +4.2 4238 3.1 SIX4 MAZ L3MBTL2 SP1 ZNF121 NONO FOXK2 ZNF8 ZNF600 FOS NDUFB8P2 RPS6KB1 TUBD1 HEATR6 TEX14 CA4 PIR37538 YPEL2 ENSG00000278863
GH17J059356 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +18.9 18948 2.1 MNT ZFHX2 JUND ZNF629 FOS FOSL2 PRDM10 EGR2 SETDB1 YPEL2 SMG8 SKA2 DHX40 ENSG00000278863 PIR37538
GH17J059358 Enhancer 1 ENCODE dbSUPER 0.4 +16.4 16415 0.1 PKNOX1 NEUROD1 ZBTB7B ZNF366 EGR1 FOS EGR2 TSHZ1 ZEB2 ZNF843 YPEL2 ENSG00000278863 PIR37538
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR37538 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR37538 Gene

Genomic Locations for PIR37538 Gene
chr17:59,338,830-59,338,856
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr17:57,416,191-57,416,217
(GRCh37/hg19)
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR37538 Gene

Genes around PIR37538 on UCSC Golden Path with GeneCards custom track

PIR37538 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR37538 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR37538 Gene

Function for PIR37538 Gene

Phenotypes From GWAS Catalog for PIR37538 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR37538 Gene

Localization for PIR37538 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR37538 Gene

Pathways & Interactions for PIR37538 Gene

SuperPathways for PIR37538 Gene

No Data Available

Interacting Proteins for PIR37538 Gene

Gene Ontology (GO) - Biological Process for PIR37538 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR37538 Gene

Drugs & Compounds for PIR37538 Gene

No Compound Related Data Available

Transcripts for PIR37538 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR37538 Gene

No ASD Table

Relevant External Links for PIR37538 Gene

GeneLoc Exon Structure for
PIR37538

No data available for mRNA/cDNA for PIR37538 Gene

Expression for PIR37538 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR37538 Gene

Orthologs for PIR37538 Gene

No data available for Orthologs and Evolution for PIR37538 Gene

Paralogs for PIR37538 Gene

No data available for Paralogs for PIR37538 Gene

Variants for PIR37538 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR37538 Gene

Disorders for PIR37538 Gene

No disorders were found for PIR37538 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR37538 Gene

Publications for PIR37538 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR37538 Gene

Sources for PIR37538 Gene

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