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Aliases for PIR37478 Gene

Subcategory (RNA class) for PIR37478 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR37478 Gene

No Aliases found

ORGUL Members for PIR37478 Gene

No data available for External Ids for PIR37478 Gene

Summaries for PIR37478 Gene

GeneCards Summary for PIR37478 Gene

PIR37478 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR37478 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR37478 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR37478 Gene

Genomics for PIR37478 Gene

GeneHancer (GH) Regulatory Elements for PIR37478 Gene

Promoters and enhancers for PIR37478 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I046693 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 550.8 +1.4 1441 5.2 ELF3 PKNOX1 MLX ARID4B DNMT3B THRB ZSCAN9 RAD21 RARA SLC30A9 ARHGAP1 PIR37478 F2
GH11I046692 Enhancer 0.4 ENCODE dbSUPER 550.8 -1.7 -1719 0.2 PIR37478 F2 SNORD67 CKAP5 ARHGAP1 GC11P046676
GH11I046698 Enhancer 0.6 dbSUPER 0.8 +4.7 4652 1 MAZ THRB RARA GLIS2 ZFHX2 EGR1 SMAD4 EGR2 ARHGAP1 ZNF408 PIR37478
GH11I046686 Enhancer 0.6 ENCODE dbSUPER 0.4 -6.7 -6698 2.1 ZNF692 ZIC2 NR2F2 F2 SNORD67 CKAP5 ACP2 PIR37478 GC11P046676 ARHGAP1
GH11I046682 Enhancer 0.6 dbSUPER 0.4 -10.5 -10502 2.3 SMARCA5 BCOR ZMYM3 USF2 MITF ATF4 JUND ZFP36 KDM1A MAFK MDK LRP4 LARGE2 GC11P046676 PIR37478 ARHGAP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR37478 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR37478 Gene

Genomic Locations for PIR37478 Gene
chr11:46,694,365-46,694,392
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr11:46,715,843-46,716,033
(GRCh37/hg19)

Genomic View for PIR37478 Gene

Genes around PIR37478 on UCSC Golden Path with GeneCards custom track

PIR37478 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR37478 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR37478 Gene

Proteins for PIR37478 Gene

Post-translational modifications for PIR37478 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR37478 Gene

Domains & Families for PIR37478 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR37478 Gene

Function for PIR37478 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR37478 Gene

Localization for PIR37478 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR37478 Gene

Pathways & Interactions for PIR37478 Gene

SuperPathways for PIR37478 Gene

No Data Available

Interacting Proteins for PIR37478 Gene

Gene Ontology (GO) - Biological Process for PIR37478 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR37478 Gene

Drugs & Compounds for PIR37478 Gene

No Compound Related Data Available

Transcripts for PIR37478 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR37478 Gene

No ASD Table

Relevant External Links for PIR37478 Gene

GeneLoc Exon Structure for
PIR37478

No data available for mRNA/cDNA for PIR37478 Gene

Expression for PIR37478 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR37478 Gene

Orthologs for PIR37478 Gene

No data available for Orthologs and Evolution for PIR37478 Gene

Paralogs for PIR37478 Gene

No data available for Paralogs for PIR37478 Gene

Variants for PIR37478 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR37478 Gene

Disorders for PIR37478 Gene

No disorders were found for PIR37478 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR37478 Gene

Publications for PIR37478 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR37478 Gene

Sources for PIR37478 Gene

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