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Aliases for PIR37473 Gene

Subcategory (RNA class) for PIR37473 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR37473 Gene

No Aliases found

ORGUL Members for PIR37473 Gene

No data available for External Ids for PIR37473 Gene

Summaries for PIR37473 Gene

GeneCards Summary for PIR37473 Gene

PIR37473 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR37473 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR37473 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR37473 Gene

Genomics for PIR37473 Gene

GeneHancer (GH) Regulatory Elements for PIR37473 Gene

Promoters and enhancers for PIR37473 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J157377 Enhancer 0.8 ENCODE 650.7 -0.4 -369 0.1 RB1 ARNT ZNF2 RAD21 CHAMP1 ARID2 ZNF143 ATF7 IKZF2 SMARCA5 PIR37473 FCRL5 GC01P157412
GH01J157402 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.3 -26.7 -26691 2.3 HDAC1 BMI1 IRF4 ZNF766 GATA2 BCLAF1 IKZF2 RUNX3 REST ELF1 GC01P157412 PIR37473
GH01J157390 Enhancer 0.8 Ensembl ENCODE 0.4 -14.0 -14004 1.6 JUN MAFG MAFF ZNF316 ZNF766 JUND ZSCAN5C PRDM1 MAFK EMSY PIR37473 GC01P157412
GH01J157399 Enhancer 0.7 ENCODE 0.3 -22.7 -22746 1 HDGF CTCF PKNOX1 BACH1 ATF7 RUNX3 IKZF2 SMARCA5 ZNF687 NR2F1 GC01P157412 PIR37473
GH01J157400 Enhancer 0.6 ENCODE 0.3 -23.5 -23481 0.4 CTCF PKNOX1 TARDBP IKZF1 BACH1 NBN IKZF2 RUNX3 GC01P157412 PIR37473
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR37473 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR37473 Gene

Genomic Locations for PIR37473 Gene
chr1:157,377,080-157,377,107
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr1:157,346,870-157,346,897
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR37473 Gene

Genes around PIR37473 on UCSC Golden Path with GeneCards custom track

PIR37473 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR37473 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR37473 Gene

Function for PIR37473 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR37473 Gene

Localization for PIR37473 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR37473 Gene

Pathways & Interactions for PIR37473 Gene

SuperPathways for PIR37473 Gene

No Data Available

Interacting Proteins for PIR37473 Gene

Gene Ontology (GO) - Biological Process for PIR37473 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR37473 Gene

Drugs & Compounds for PIR37473 Gene

No Compound Related Data Available

Transcripts for PIR37473 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR37473 Gene

No ASD Table

Relevant External Links for PIR37473 Gene

GeneLoc Exon Structure for
PIR37473

No data available for mRNA/cDNA for PIR37473 Gene

Expression for PIR37473 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR37473 Gene

Orthologs for PIR37473 Gene

No data available for Orthologs and Evolution for PIR37473 Gene

Paralogs for PIR37473 Gene

No data available for Paralogs for PIR37473 Gene

Variants for PIR37473 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR37473 Gene

Disorders for PIR37473 Gene

No disorders were found for PIR37473 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR37473 Gene

Publications for PIR37473 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR37473 Gene

Sources for PIR37473 Gene

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