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Aliases for PIR37400 Gene

Subcategory (RNA class) for PIR37400 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR37400 Gene

No Aliases found

ORGUL Members for PIR37400 Gene

Previous GeneCards Identifiers for PIR37400 Gene

  • GC15M089175

No data available for External Ids for PIR37400 Gene

Summaries for PIR37400 Gene

GeneCards Summary for PIR37400 Gene

PIR37400 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR37400 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR37400 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR37400 Gene

Genomics for PIR37400 Gene

GeneHancer (GH) Regulatory Elements for PIR37400 Gene

Promoters and enhancers for PIR37400 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J088633 Enhancer 0.3 dbSUPER 650.7 -1.1 -1087 0.8 PRDM1 GC15M088633 PIR37400 ISG20
GH15J088620 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.4 +6.0 5956 11.7 HDGF PKNOX1 CLOCK SMAD1 MLX ARID4B SIN3A DMAP1 ZBTB7B IRF4 AEN POLG HMGB1P8 FANCI ISG20 GC15M088633 PIR37400 MIR3529
GH15J088614 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +17.0 17000 2.3 PKNOX1 ARID4B SIN3A ZNF2 YY1 ZNF121 ZNF213 ELK1 ARID2 ZNF143 AEN MIR3529 GC15M088633 PIR37400
GH15J088613 Enhancer 0.8 ENCODE 0.4 +19.1 19071 1.3 BCOR ZNF768 ZFP64 ZNF140 SIN3A ZMYM3 BATF IRF4 ZNF697 ETS1 GC15P088612 GC15P088613 MIR3529 MIR7-2 POLG ENSG00000261478 AEN GC15M088633 PIR37400
GH15J088612 Enhancer 0.5 ENCODE 0.3 +20.1 20076 0.2 ZNF341 REST ZBTB8A ZNF623 ZNF558 GC15P088612 GC15P088613 MIR3529 MIR7-2 AEN GC15M088633 PIR37400
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR37400 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR37400 Gene

Genomic Locations for PIR37400 Gene
chr15:88,632,381-88,632,411
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand
chr15:89,175,612-89,175,642
(GRCh37/hg19)
Size:
31 bases
Orientation:
Minus strand

Genomic View for PIR37400 Gene

Genes around PIR37400 on UCSC Golden Path with GeneCards custom track

PIR37400 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR37400 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR37400 Gene

ORGUL Member Location for PIR37400 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR37400 Gene

Function for PIR37400 Gene

Phenotypes From GWAS Catalog for PIR37400 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR37400 Gene

Localization for PIR37400 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR37400 Gene

Pathways & Interactions for PIR37400 Gene

SuperPathways for PIR37400 Gene

No Data Available

Interacting Proteins for PIR37400 Gene

Gene Ontology (GO) - Biological Process for PIR37400 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR37400 Gene

Drugs & Compounds for PIR37400 Gene

No Compound Related Data Available

Transcripts for PIR37400 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR37400 Gene

No ASD Table

Relevant External Links for PIR37400 Gene

GeneLoc Exon Structure for
PIR37400

No data available for mRNA/cDNA for PIR37400 Gene

Expression for PIR37400 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR37400 Gene

Orthologs for PIR37400 Gene

No data available for Orthologs and Evolution for PIR37400 Gene

Paralogs for PIR37400 Gene

No data available for Paralogs for PIR37400 Gene

Variants for PIR37400 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR37400 Gene

Disorders for PIR37400 Gene

No disorders were found for PIR37400 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR37400 Gene

Publications for PIR37400 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR37400 Gene

Sources for PIR37400 Gene

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