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Aliases for PIR37280 Gene

Subcategory (RNA class) for PIR37280 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR37280 Gene

No Aliases found

ORGUL Members for PIR37280 Gene

Previous GeneCards Identifiers for PIR37280 Gene

  • GC05M139243

No data available for External Ids for PIR37280 Gene

Summaries for PIR37280 Gene

GeneCards Summary for PIR37280 Gene

PIR37280 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR37280 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR37280 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR37280 Gene

Genomics for PIR37280 Gene

GeneHancer (GH) Regulatory Elements for PIR37280 Gene

Promoters and enhancers for PIR37280 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I139865 Enhancer 0.8 Ensembl dbSUPER 550.8 -0.2 -164 0.2 CTCF ZNF654 TRIM22 REST SALL2 RAD21 ARID2 SMC3 ZNF143 CHD2 PIR37280 IGIP MATR3 PCDHA6 DNAJC18 PCDHA5 PSD2 PCDHA10 PCDHA2 LRRTM2
GH05I139862 Enhancer 0.4 dbSUPER 550.8 +0.9 870 0.3 CTCF GATA3 TCF7L2 PIR37280 PSD2 ENSG00000250692 NRG2
GH05I139861 Enhancer 0.4 dbSUPER 550.8 +2.0 1990 0.5 BCOR ZFP36 ZMYM3 PIR37280 ENSG00000250692 NRG2
GH05I139864 Enhancer 0.4 dbSUPER 550.8 -0.9 -871 0.3 CTCF MTA3 EZH2 PIR37280 PSD2 GC05P139869 NRG2
GH05I139847 Promoter/Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +15.6 15554 1.6 SMARCA5 NCOA6 MXI1 ZNF687 L3MBTL2 HLF BACH1 SIN3A ELF1 POLR2A ENSG00000250692 PSD2 PIR37280 NRG2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR37280 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR37280 Gene

Genomic Locations for PIR37280 Gene
chr5:139,863,909-139,863,937
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr5:139,243,494-139,243,522
(GRCh37/hg19)

Genomic View for PIR37280 Gene

Genes around PIR37280 on UCSC Golden Path with GeneCards custom track

PIR37280 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR37280 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR37280 Gene

Proteins for PIR37280 Gene

Post-translational modifications for PIR37280 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR37280 Gene

Domains & Families for PIR37280 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR37280 Gene

Function for PIR37280 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR37280 Gene

Localization for PIR37280 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR37280 Gene

Pathways & Interactions for PIR37280 Gene

SuperPathways for PIR37280 Gene

No Data Available

Interacting Proteins for PIR37280 Gene

Gene Ontology (GO) - Biological Process for PIR37280 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR37280 Gene

Drugs & Compounds for PIR37280 Gene

No Compound Related Data Available

Transcripts for PIR37280 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR37280 Gene

No ASD Table

Relevant External Links for PIR37280 Gene

GeneLoc Exon Structure for
PIR37280

No data available for mRNA/cDNA for PIR37280 Gene

Expression for PIR37280 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR37280 Gene

Orthologs for PIR37280 Gene

No data available for Orthologs and Evolution for PIR37280 Gene

Paralogs for PIR37280 Gene

No data available for Paralogs for PIR37280 Gene

Variants for PIR37280 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR37280 Gene

Disorders for PIR37280 Gene

No disorders were found for PIR37280 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR37280 Gene

Publications for PIR37280 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR37280 Gene

Sources for PIR37280 Gene

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