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Aliases for PIR37247 Gene

Subcategory (RNA class) for PIR37247 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR37247 Gene

No Aliases found

ORGUL Members for PIR37247 Gene

No data available for External Ids for PIR37247 Gene

Summaries for PIR37247 Gene

GeneCards Summary for PIR37247 Gene

PIR37247 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR37247 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR37247 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR37247 Gene

Genomics for PIR37247 Gene

GeneHancer (GH) Regulatory Elements for PIR37247 Gene

Promoters and enhancers for PIR37247 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J052489 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.7 +3.2 3244 2.5 SP1 RXRA JUN MAX MYC NR2F2 YY1 NT5DC2 SMIM4 STAB1 PIR37247 NISCH
GH03J052483 Enhancer 0.7 ENCODE dbSUPER 0.7 -3.7 -3669 1.3 SOX13 RARA ZKSCAN1 NR2F2 NT5DC2 SMIM4 NISCH TNNC1 SEMA3G GLYCTK-AS1 MIR135A1 GLYCTK WDR82 PIR37247
GH03J052466 Enhancer 1 VISTA FANTOM5 dbSUPER 0.4 -19.4 -19430 3 ZNF121 ATF4 POLR2A MNT PRDM1 NR2F2 NT5DC2 SEMA3G STAB1 SMIM4 RNU6-856P RNU6ATAC16P PBRM1 GNL3 ENSG00000252787 SNORD19
GH03J052482 Enhancer 0.8 ENCODE dbSUPER 0.4 -5.3 -5291 0.2 CTCF SIN3A RAD21 SCRT2 IKZF1 RBM22 ZNF143 ZBTB33 NISCH NT5DC2 SMIM4 TNNC1 SEMA3G GLYCTK-AS1 MIR135A1 WDR82 GLYCTK PIR37247
GH03J052470 Enhancer 0.7 dbSUPER 0.4 -15.8 -15777 2.9 CTCF FOXA2 SAP130 ARID4B MAX RAD21 YY1 POLR2A EGR1 ZNF143 NT5DC2 PPM1M STAB1 SEMA3G SMIM4 RNU6-856P RNU6ATAC16P GNL3 ENSG00000252787 SNORD19
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR37247 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR37247 Gene

Genomic Locations for PIR37247 Gene
chr3:52,487,611-52,487,640
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr3:52,521,627-52,521,656
(GRCh37/hg19)
Size:
30 bases
Orientation:
Plus strand

Genomic View for PIR37247 Gene

Genes around PIR37247 on UCSC Golden Path with GeneCards custom track

PIR37247 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR37247 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR37247 Gene

Function for PIR37247 Gene

Phenotypes From GWAS Catalog for PIR37247 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR37247 Gene

Localization for PIR37247 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR37247 Gene

Pathways & Interactions for PIR37247 Gene

SuperPathways for PIR37247 Gene

No Data Available

Interacting Proteins for PIR37247 Gene

Gene Ontology (GO) - Biological Process for PIR37247 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR37247 Gene

Drugs & Compounds for PIR37247 Gene

No Compound Related Data Available

Transcripts for PIR37247 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR37247 Gene

No ASD Table

Relevant External Links for PIR37247 Gene

GeneLoc Exon Structure for
PIR37247

No data available for mRNA/cDNA for PIR37247 Gene

Expression for PIR37247 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR37247 Gene

Orthologs for PIR37247 Gene

No data available for Orthologs and Evolution for PIR37247 Gene

Paralogs for PIR37247 Gene

No data available for Paralogs for PIR37247 Gene

Variants for PIR37247 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR37247 Gene

Disorders for PIR37247 Gene

No disorders were found for PIR37247 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR37247 Gene

Publications for PIR37247 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR37247 Gene

Sources for PIR37247 Gene

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