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Aliases for PIR37218 Gene

Subcategory (RNA class) for PIR37218 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR37218 Gene

No Aliases found

ORGUL Members for PIR37218 Gene

Previous GeneCards Identifiers for PIR37218 Gene

  • GC01P059280

No data available for External Ids for PIR37218 Gene

Summaries for PIR37218 Gene

GeneCards Summary for PIR37218 Gene

PIR37218 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR37218 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR37218 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR37218 Gene

Genomics for PIR37218 Gene

GeneHancer (GH) Regulatory Elements for PIR37218 Gene

Promoters and enhancers for PIR37218 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J058812 Promoter/Enhancer 2.3 FANTOM5 Ensembl ENCODE dbSUPER 650.7 +1.0 1040 7.8 FOXA2 ARID4B SIN3A FEZF1 DMAP1 YY1 POLR2B ZNF766 ZNF207 ZNF143 PIR37218 JUN MYSM1 LINC01135 FGGY ENSG00000272226 LOC101926907 ENSG00000231740
GH01J058822 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +9.0 8950 2.5 HDAC1 KLF1 JUN TEAD4 TAL1 TCF12 FOSL1 NCOR1 CBFA2T2 FOSL2 JUN LINC01135 PIR37218 ENSG00000231740
GH01J058848 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +34.2 34217 2.6 SIN3A RAD21 TCF12 GLIS2 EGR1 ZSCAN5C FOS EGR2 ELK4 SMARCC1 ENSG00000231740 LINC01135 JUN FGGY GC01M058846 PIR37218
GH01J058839 Enhancer 0.7 ENCODE dbSUPER 0.3 +25.0 24963 1.1 SCRT1 JUND SCRT2 ZMYM3 JUN LINC01135 ENSG00000231740 PIR37218
GH01J058841 Enhancer 0.7 dbSUPER 0.3 +26.7 26664 1.5 CTCF L3MBTL2 TEAD4 BHLHE40 REST RAD21 ZNF592 ZNF148 ZNF512 IKZF1 JUN LINC01135 ENSG00000231740 PIR37218
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR37218 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR37218 Gene

Genomic Locations for PIR37218 Gene
chr1:58,815,269-58,815,295
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr1:59,280,941-59,280,967
(GRCh37/hg19)
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR37218 Gene

Genes around PIR37218 on UCSC Golden Path with GeneCards custom track

PIR37218 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR37218 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR37218 Gene

Function for PIR37218 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR37218 Gene

Localization for PIR37218 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR37218 Gene

Pathways & Interactions for PIR37218 Gene

SuperPathways for PIR37218 Gene

No Data Available

Interacting Proteins for PIR37218 Gene

Gene Ontology (GO) - Biological Process for PIR37218 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR37218 Gene

Drugs & Compounds for PIR37218 Gene

No Compound Related Data Available

Transcripts for PIR37218 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR37218 Gene

No ASD Table

Relevant External Links for PIR37218 Gene

GeneLoc Exon Structure for
PIR37218

No data available for mRNA/cDNA for PIR37218 Gene

Expression for PIR37218 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR37218 Gene

Orthologs for PIR37218 Gene

No data available for Orthologs and Evolution for PIR37218 Gene

Paralogs for PIR37218 Gene

No data available for Paralogs for PIR37218 Gene

Variants for PIR37218 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR37218 Gene

Disorders for PIR37218 Gene

No disorders were found for PIR37218 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR37218 Gene

Publications for PIR37218 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR37218 Gene

Sources for PIR37218 Gene

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