Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR37216 Gene

Subcategory (RNA class) for PIR37216 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR37216 Gene

No Aliases found

ORGUL Members for PIR37216 Gene

Previous GeneCards Identifiers for PIR37216 Gene

  • GC0XM102682

No data available for External Ids for PIR37216 Gene

Summaries for PIR37216 Gene

GeneCards Summary for PIR37216 Gene

PIR37216 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR37216 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR37216 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR37216 Gene

Genomics for PIR37216 Gene

GeneHancer (GH) Regulatory Elements for PIR37216 Gene

Promoters and enhancers for PIR37216 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ103428 Enhancer 0.2 ENCODE 650.7 -1.4 -1410 1 PIR37216 TCEAL7 LL0XNC01-250H12.3 PIR62779
GH0XJ103423 Enhancer 0.6 ENCODE 0.7 +3.0 3030 1.6 USF1 ZNF680 ZBTB11 ZFP64 ZNF140 ZC3H11A ZNF518A ZNF697 SP1 PRDM12 MORF4L2-AS1 BEX4 LINC00630 BEX3 ARMCX5 ENSG00000239407 PIR37216 LL0XNC01-250H12.3 ENSG00000281091
GH0XJ103403 Promoter/Enhancer 1.4 Ensembl ENCODE 0.3 +22.5 22453 1.6 HDAC1 ATF1 SIN3A BMI1 ZBTB40 YY1 ZNF335 ATF7 CREM SMAD5 ENSG00000281091 LL0XNC01-250H12.3 BEX4 TCEAL5 BEX3 PIR37216
GH0XJ103452 Enhancer 0.9 Ensembl ENCODE 0.3 -26.4 -26382 2 ZBTB21 JUN INSM2 MAX ZNF366 FOS MAFK ZBTB20 RFX1 CEBPB BEX4 PIR62779 PIR37216 LL0XNC01-250H12.3
GH0XJ103438 Enhancer 0.6 ENCODE 0.4 -13.0 -12954 2.6 NANOG TEAD4 TAL1 CBFA2T3 TCF12 NCOR1 IKZF1 CBFA2T2 BEX4 BEX3 ENSG00000234405 LOC100420653 TCEAL8 PIR37216 PIR62779 LL0XNC01-250H12.3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR37216 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR37216 Gene

Genomic Locations for PIR37216 Gene
chrX:103,427,223-103,427,250
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chrX:102,682,151-102,682,178
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR37216 Gene

Genes around PIR37216 on UCSC Golden Path with GeneCards custom track

PIR37216 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR37216 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR37216 Gene

Function for PIR37216 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR37216 Gene

Localization for PIR37216 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR37216 Gene

Pathways & Interactions for PIR37216 Gene

SuperPathways for PIR37216 Gene

No Data Available

Interacting Proteins for PIR37216 Gene

Gene Ontology (GO) - Biological Process for PIR37216 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR37216 Gene

Drugs & Compounds for PIR37216 Gene

No Compound Related Data Available

Transcripts for PIR37216 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR37216 Gene

No ASD Table

Relevant External Links for PIR37216 Gene

GeneLoc Exon Structure for
PIR37216

No data available for mRNA/cDNA for PIR37216 Gene

Expression for PIR37216 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR37216 Gene

Orthologs for PIR37216 Gene

No data available for Orthologs and Evolution for PIR37216 Gene

Paralogs for PIR37216 Gene

No data available for Paralogs for PIR37216 Gene

Variants for PIR37216 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR37216 Gene

Disorders for PIR37216 Gene

No disorders were found for PIR37216 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR37216 Gene

Publications for PIR37216 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR37216 Gene

Sources for PIR37216 Gene

Content
Loading form....