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Aliases for PIR37172 Gene

Subcategory (RNA class) for PIR37172 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR37172 Gene

No Aliases found

ORGUL Members for PIR37172 Gene

Previous GeneCards Identifiers for PIR37172 Gene

  • GC17M076988

No data available for External Ids for PIR37172 Gene

Summaries for PIR37172 Gene

GeneCards Summary for PIR37172 Gene

PIR37172 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR37172 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR37172 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR37172 Gene

Genomics for PIR37172 Gene

GeneHancer (GH) Regulatory Elements for PIR37172 Gene

Promoters and enhancers for PIR37172 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J078994 Enhancer 0.9 ENCODE dbSUPER 650.7 -1.4 -1387 0.6 CTCF ZNF223 SIN3A ZNF2 RAD21 GLIS2 PATZ1 ZNF143 SMC3 ZNF444 GC17M079033 GC17M079112 GC17M079116 GC17M079118 PIR54418 PIR47088 PIR40001 PIR56882 PIR34009 PIR58809
GH17J078992 Enhancer 0.6 ENCODE dbSUPER 650.7 -0.8 -761 0.2 CTCF CBFA2T3 GC17M079033 GC17M079112 GC17M079116 GC17M079118 PIR54418 PIR47088 PIR40001 PIR56882 PIR34009 PIR58809
GH17J078985 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +5.1 5053 2.6 PKNOX1 ARID4B SIN3A ZFP91 FOS CAVIN1 REST ZNF592 KAT8 MEF2D CANT1 USP36 C1QTNF1 ENGASE PIR37172 LGALS3BP
GH17J078988 Enhancer 0.3 ENCODE 0.7 +3.7 3688 0.1 RFX1 PIR37172 LGALS3BP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR37172 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR37172 Gene

Genomic Locations for PIR37172 Gene
chr17:78,991,984-78,992,013
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr17:76,988,066-76,988,095
(GRCh37/hg19)
Size:
30 bases
Orientation:
Minus strand

Genomic View for PIR37172 Gene

Genes around PIR37172 on UCSC Golden Path with GeneCards custom track

PIR37172 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR37172 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR37172 Gene

Function for PIR37172 Gene

Phenotypes From GWAS Catalog for PIR37172 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR37172 Gene

Localization for PIR37172 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR37172 Gene

Pathways & Interactions for PIR37172 Gene

SuperPathways for PIR37172 Gene

No Data Available

Interacting Proteins for PIR37172 Gene

Gene Ontology (GO) - Biological Process for PIR37172 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR37172 Gene

Drugs & Compounds for PIR37172 Gene

No Compound Related Data Available

Transcripts for PIR37172 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR37172 Gene

No ASD Table

Relevant External Links for PIR37172 Gene

GeneLoc Exon Structure for
PIR37172

No data available for mRNA/cDNA for PIR37172 Gene

Expression for PIR37172 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR37172 Gene

Orthologs for PIR37172 Gene

No data available for Orthologs and Evolution for PIR37172 Gene

Paralogs for PIR37172 Gene

No data available for Paralogs for PIR37172 Gene

Variants for PIR37172 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR37172 Gene

Disorders for PIR37172 Gene

No disorders were found for PIR37172 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR37172 Gene

Publications for PIR37172 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR37172 Gene

Sources for PIR37172 Gene

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