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Aliases for PIR37139 Gene

Subcategory (RNA class) for PIR37139 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR37139 Gene

No Aliases found

No data available for External Ids for PIR37139 Gene

Summaries for PIR37139 Gene

GeneCards Summary for PIR37139 Gene

PIR37139 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR37139 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR37139

Additional gene information for PIR37139 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR37139 Gene

Genomics for PIR37139 Gene

GeneHancer (GH) Regulatory Elements for PIR37139 Gene

Promoters and enhancers for PIR37139 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J019936 Enhancer 0.5 dbSUPER 650.7 +1.1 1071 1 IRF9 ZNF639 POLR2B POLR2A NCOA4 ZNF354B SUPT5H PIR37139 DGCR8 TRMT2A TXNRD2 LINC01311 LOC100420177 ZDHHC8 COMT ARVCF
GH22J019937 Enhancer 1 ENCODE dbSUPER 0.7 +2.5 2519 1.3 ELF3 FOXA2 ARID4B RAD21 RARA ZNF614 CREM THAP11 MIXL1 RXRA COMT TRMT2A ESS2 RANBP1 ARVCF TXNRD2 PIR37139
GH22J019933 Promoter/Enhancer 0.8 EPDnew dbSUPER 0.7 -2.1 -2079 0.1 CBFA2T3 TXNRD2 PIR37139 RPL8P5
GH22J019889 Enhancer 1.5 Ensembl ENCODE dbSUPER 0.3 -43.4 -43360 5 HDGF PKNOX1 SMAD1 FOXA2 MLX ARNT ZFP64 ARID4B FEZF1 SLC30A9 RPL8P5 ENSG00000273300 TRMT2A TBX1 RPL7AP70 MED15 DGCR8 RTL10 TXNRD2 TANGO2
GH22J019909 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.3 -25.6 -25648 1.1 HDGF PKNOX1 CLOCK SMAD1 FOXA2 ARNT ARID4B YBX1 ZNF2 IRF4 RPL7AP70 ENSG00000273300 TRMT2A MED15 DGCR8 RPL8P5 DGCR11 SCARF2 ABHD17AP4 UFD1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR37139 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR37139 Gene

Genomic Locations for PIR37139 Gene
chr22:19,935,625-19,935,661
(GRCh38/hg38)
Size:
37 bases
Orientation:
Plus strand

Genomic View for PIR37139 Gene

Genes around PIR37139 on UCSC Golden Path with GeneCards custom track

PIR37139 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR37139 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR37139 Gene

ORGUL Member Location for PIR37139 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR37139 Gene

Function for PIR37139 Gene

Phenotypes From GWAS Catalog for PIR37139 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR37139 Gene

Localization for PIR37139 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR37139 Gene

Pathways & Interactions for PIR37139 Gene

SuperPathways for PIR37139 Gene

No Data Available

Interacting Proteins for PIR37139 Gene

Gene Ontology (GO) - Biological Process for PIR37139 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR37139 Gene

Drugs & Compounds for PIR37139 Gene

No Compound Related Data Available

Transcripts for PIR37139 Gene

fRNAdb Secondary structures for PIR37139 Gene

  • FR087183
  • FR378722
  • FR010466
  • FR169604
  • FR268326

Alternative Splicing Database (ASD) splice patterns (SP) for PIR37139 Gene

No ASD Table

Relevant External Links for PIR37139 Gene

GeneLoc Exon Structure for
PIR37139

No data available for mRNA/cDNA for PIR37139 Gene

Expression for PIR37139 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR37139 Gene

Orthologs for PIR37139 Gene

No data available for Orthologs and Evolution for PIR37139 Gene

Paralogs for PIR37139 Gene

No data available for Paralogs for PIR37139 Gene

Variants for PIR37139 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR37139 Gene

Disorders for PIR37139 Gene

No disorders were found for PIR37139 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR37139 Gene

Publications for PIR37139 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR37139 Gene

Sources for PIR37139 Gene

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