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Aliases for PIR36896 Gene

Subcategory (RNA class) for PIR36896 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR36896 Gene

No Aliases found

ORGUL Members for PIR36896 Gene

No data available for External Ids for PIR36896 Gene

Summaries for PIR36896 Gene

GeneCards Summary for PIR36896 Gene

PIR36896 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR36896 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR36896 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR36896 Gene

Genomics for PIR36896 Gene

GeneHancer (GH) Regulatory Elements for PIR36896 Gene

Promoters and enhancers for PIR36896 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I003384 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -40.5 -40456 6.5 HDGF PKNOX1 ATF1 SIN3A BMI1 BATF IRF4 DNMT3B ZBTB40 YY1 RGS12 HGFAC DOK7 HTT PIR55428 PIR36896
GH04I003368 Promoter/Enhancer 1.9 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.2 -57.6 -57644 3.1 RING1 MXI1 KLF1 ZBTB21 JUN MAX SIN3A BMI1 FEZF1 ZIC2 RGS12 PIR55428 GC04M003368 NOP14-AS1 TMEM128 FAM193A ZBTB49 PIR36896
GH04I003407 Enhancer 0.9 ENCODE 0.4 -19.7 -19719 1.7 MLX ZFP64 ARID4B DMAP1 ETS1 YY1 SLC30A9 RXRA SP5 ZHX2 HGFAC DOK7 PIR36896 PIR55428 RGS12
GH04I003372 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -55.1 -55074 1.2 PKNOX1 BACH1 MAX EBF1 BMI1 IRF4 POLR2A IKZF2 RUNX3 CBFB SH3BP2 RGS12 HTT-AS PIR55428 PIR36896
GH04I003401 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.3 -25.5 -25465 2.3 VEZF1 RGS12 DOK7 HTT PIR36896 PIR55428
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR36896 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR36896 Gene

Genomic Locations for PIR36896 Gene
chr4:3,428,091-3,428,120
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr4:3,429,818-3,429,847
(GRCh37/hg19)

Genomic View for PIR36896 Gene

Genes around PIR36896 on UCSC Golden Path with GeneCards custom track

PIR36896 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR36896 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR36896 Gene

Proteins for PIR36896 Gene

Post-translational modifications for PIR36896 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR36896 Gene

Domains & Families for PIR36896 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR36896 Gene

Function for PIR36896 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR36896 Gene

Localization for PIR36896 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR36896 Gene

Pathways & Interactions for PIR36896 Gene

SuperPathways for PIR36896 Gene

No Data Available

Interacting Proteins for PIR36896 Gene

Gene Ontology (GO) - Biological Process for PIR36896 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR36896 Gene

Drugs & Compounds for PIR36896 Gene

No Compound Related Data Available

Transcripts for PIR36896 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR36896 Gene

No ASD Table

Relevant External Links for PIR36896 Gene

GeneLoc Exon Structure for
PIR36896

No data available for mRNA/cDNA for PIR36896 Gene

Expression for PIR36896 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR36896 Gene

Orthologs for PIR36896 Gene

No data available for Orthologs and Evolution for PIR36896 Gene

Paralogs for PIR36896 Gene

No data available for Paralogs for PIR36896 Gene

Variants for PIR36896 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR36896 Gene

Disorders for PIR36896 Gene

No disorders were found for PIR36896 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR36896 Gene

Publications for PIR36896 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR36896 Gene

Sources for PIR36896 Gene

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