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Aliases for PIR36891 Gene

Subcategory (RNA class) for PIR36891 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR36891 Gene

No Aliases found

ORGUL Members for PIR36891 Gene

Previous GeneCards Identifiers for PIR36891 Gene

  • GC12P111888

No data available for External Ids for PIR36891 Gene

Summaries for PIR36891 Gene

GeneCards Summary for PIR36891 Gene

PIR36891 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR36891 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR36891 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR36891 Gene

Genomics for PIR36891 Gene

GeneHancer (GH) Regulatory Elements for PIR36891 Gene

Promoters and enhancers for PIR36891 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J111451 Enhancer 1.1 Ensembl ENCODE dbSUPER 600.7 +1.0 1023 1.3 CTCF POLR2A RAD21 ARID2 REST TRIM22 BCLAF1 SMC3 SUPT5H FOXA1 PIR36891 SH2B3 PHETA1 ADAM1A ENSG00000272215 ATXN2
GH12J111448 Enhancer 0.7 Ensembl dbSUPER 600.7 -0.7 -651 0.8 POLR2A SUPT5H KDM1A ZBTB33 CBFA2T3 PIR39768 PIR36891 PIR31628 SH2B3 PHETA1 ALDH2 ATXN2
GH12J111450 Enhancer 0.4 dbSUPER 600.7 +0.0 29 0.5 POLR2A SUPT5H ZBTB33 PIR39768 PIR36891 SH2B3 PHETA1 ENSG00000272215 ATXN2
GH12J111466 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +18.9 18949 5.2 MAFK SP1 FOXA2 NFE2 JUND MAFG ZBTB33 HNF4A BHLHE40 RXRA SH2B3 ALDH2 ADAM1A ATXN2 PIR36891 ENSG00000272215
GH12J111453 Enhancer 0.7 ENCODE dbSUPER 0.7 +4.4 4439 3.3 MAFK RFX1 POLR2A SUPT5H GLIS1 SH2B3 PHETA1 ALDH2 PIR36891 ENSG00000272215 ATXN2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR36891 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR36891 Gene

Genomic Locations for PIR36891 Gene
chr12:111,450,452-111,450,479
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr12:111,888,256-111,888,283
(GRCh37/hg19)
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR36891 Gene

Genes around PIR36891 on UCSC Golden Path with GeneCards custom track

PIR36891 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR36891 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR36891 Gene

Proteins for PIR36891 Gene

Post-translational modifications for PIR36891 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR36891 Gene

Domains & Families for PIR36891 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR36891 Gene

Function for PIR36891 Gene

Phenotypes From GWAS Catalog for PIR36891 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR36891 Gene

Localization for PIR36891 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR36891 Gene

Pathways & Interactions for PIR36891 Gene

PathCards logo

SuperPathways for PIR36891 Gene

No Data Available

Interacting Proteins for PIR36891 Gene

Gene Ontology (GO) - Biological Process for PIR36891 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR36891 Gene

Drugs & Compounds for PIR36891 Gene

No Compound Related Data Available

Transcripts for PIR36891 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR36891 Gene

No ASD Table

Relevant External Links for PIR36891 Gene

GeneLoc Exon Structure for
PIR36891

No data available for mRNA/cDNA for PIR36891 Gene

Expression for PIR36891 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR36891 Gene

Orthologs for PIR36891 Gene

No data available for Orthologs and Evolution for PIR36891 Gene

Paralogs for PIR36891 Gene

No data available for Paralogs for PIR36891 Gene

Variants for PIR36891 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR36891 Gene

Disorders for PIR36891 Gene

No disorders were found for PIR36891 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR36891 Gene

Publications for PIR36891 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR36891 Gene

Products for PIR36891 Gene

Sources for PIR36891 Gene

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