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Aliases for PIR36885 Gene

Subcategory (RNA class) for PIR36885 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR36885 Gene

No Aliases found

ORGUL Members for PIR36885 Gene

Previous GeneCards Identifiers for PIR36885 Gene

  • GC02P216199

No data available for External Ids for PIR36885 Gene

Summaries for PIR36885 Gene

GeneCards Summary for PIR36885 Gene

PIR36885 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR36885 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR36885 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR36885 Gene

Genomics for PIR36885 Gene

GeneHancer (GH) Regulatory Elements for PIR36885 Gene

Promoters and enhancers for PIR36885 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I215310 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.3 -21.6 -21638 5.5 HDGF PKNOX1 CLOCK FOXA2 MLX ARID4B SIN3A DMAP1 YY1 SLC30A9 ATIC PIR36885
GH02I215331 Enhancer 0.5 ENCODE 0.8 -2.3 -2261 2.2 IKZF1 JUNB ZSCAN29 EBF1 IKZF2 IRF4 RUNX3 ATIC PIR36885
GH02I215416 Enhancer 1.2 ENCODE dbSUPER 0.2 +84.4 84445 5.7 PKNOX1 FOXA2 MLX ARNT ARID4B DMAP1 YY1 FOS PAF1 NFYC ATIC GC02P215427 FN1 PIR36885
GH02I215408 Enhancer 0.9 ENCODE dbSUPER 0.2 +75.3 75254 2.9 JUN ZNF384 BATF FOSL1 POLR2A SCRT2 FOSL2 FOS IKZF2 PAF1 ATIC GC02P215427 FN1 PIR36885
GH02I215397 Enhancer 0.8 ENCODE dbSUPER 0.2 +62.9 62867 1 GATAD2A CTCF FOXA2 TEAD1 FOXA3 DNMT3B FOXA1 TEAD3 SP1 SSRP1 ATIC GC02P215427 FN1 PIR36885
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR36885 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR36885 Gene

Genomic Locations for PIR36885 Gene
chr2:215,334,959-215,334,985
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr2:216,199,682-216,199,708
(GRCh37/hg19)

Genomic View for PIR36885 Gene

Genes around PIR36885 on UCSC Golden Path with GeneCards custom track

PIR36885 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR36885 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR36885 Gene

Proteins for PIR36885 Gene

Post-translational modifications for PIR36885 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR36885 Gene

Domains & Families for PIR36885 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR36885 Gene

Function for PIR36885 Gene

Phenotypes From GWAS Catalog for PIR36885 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR36885 Gene

Localization for PIR36885 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR36885 Gene

Pathways & Interactions for PIR36885 Gene

SuperPathways for PIR36885 Gene

No Data Available

Interacting Proteins for PIR36885 Gene

Gene Ontology (GO) - Biological Process for PIR36885 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR36885 Gene

Drugs & Compounds for PIR36885 Gene

No Compound Related Data Available

Transcripts for PIR36885 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR36885 Gene

No ASD Table

Relevant External Links for PIR36885 Gene

GeneLoc Exon Structure for
PIR36885

No data available for mRNA/cDNA for PIR36885 Gene

Expression for PIR36885 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR36885 Gene

Orthologs for PIR36885 Gene

No data available for Orthologs and Evolution for PIR36885 Gene

Paralogs for PIR36885 Gene

No data available for Paralogs for PIR36885 Gene

Variants for PIR36885 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR36885 Gene

Disorders for PIR36885 Gene

No disorders were found for PIR36885 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR36885 Gene

Publications for PIR36885 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR36885 Gene

Sources for PIR36885 Gene

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