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Aliases for PIR36552 Gene

Subcategory (RNA class) for PIR36552 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR36552 Gene

No Aliases found

ORGUL Members for PIR36552 Gene

No data available for External Ids for PIR36552 Gene

Summaries for PIR36552 Gene

GeneCards Summary for PIR36552 Gene

PIR36552 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR36552 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR36552 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR36552 Gene

Genomics for PIR36552 Gene

GeneHancer (GH) Regulatory Elements for PIR36552 Gene

Promoters and enhancers for PIR36552 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J021505 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 600.7 -1.8 -1754 8.6 ZNF473 ZNF652 ELF3 MNT NKRF ZNF121 CEBPG RERE ZNF687 ZSCAN21 PIR32900 PIR56760 PIR45912 PIR36552 ENSG00000260277 REXO5 MFSD13B SMG1P3 SMG1P1 POLR3E
GH16J021518 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 0.4 +7.4 7367 6.2 HDGF ZNF652 ZFX ELF3 MNT NKRF POLR2A MLLT1 CEBPG RERE SMG1P3 SLC7A5P2 THUMPD1 RRN3P1 NPIPB4 NPIPB3 NPIPB5 SMG1P1 POLR3E MOSMO
GH16J021515 Enhancer 1 ENCODE dbSUPER 0.7 +3.4 3372 0.6 ZNF384 ZBTB7A SP7 KLF14 MZF1 GLIS2 PKNOX1 ZBTB8A ZNF600 ZIC2 PIR36552 SMG1P3 SLC7A5P2
GH16J021516 Enhancer 0.6 dbSUPER 0.7 +3.9 3929 0.5 ZNF384 PRDM1 MLLT1 PRDM10 KAT7 ZBTB48 ZBTB17 SCRT1 HDGF NR2F1 PIR36552 SMG1P3 SLC7A5P2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR36552 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR36552 Gene

Genomic Locations for PIR36552 Gene
chr16:21,512,334-21,512,362
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr16:21,523,655-21,523,683
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR36552 Gene

Genes around PIR36552 on UCSC Golden Path with GeneCards custom track

PIR36552 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR36552 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR36552 Gene

Proteins for PIR36552 Gene

Post-translational modifications for PIR36552 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR36552 Gene

Domains & Families for PIR36552 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR36552 Gene

Function for PIR36552 Gene

Phenotypes From GWAS Catalog for PIR36552 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR36552 Gene

Localization for PIR36552 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR36552 Gene

Pathways & Interactions for PIR36552 Gene

PathCards logo

SuperPathways for PIR36552 Gene

No Data Available

Interacting Proteins for PIR36552 Gene

Gene Ontology (GO) - Biological Process for PIR36552 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR36552 Gene

Drugs & Compounds for PIR36552 Gene

No Compound Related Data Available

Transcripts for PIR36552 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR36552 Gene

No ASD Table

Relevant External Links for PIR36552 Gene

GeneLoc Exon Structure for
PIR36552

No data available for mRNA/cDNA for PIR36552 Gene

Expression for PIR36552 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR36552 Gene

Orthologs for PIR36552 Gene

No data available for Orthologs and Evolution for PIR36552 Gene

Paralogs for PIR36552 Gene

No data available for Paralogs for PIR36552 Gene

Variants for PIR36552 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR36552 Gene

Disorders for PIR36552 Gene

No disorders were found for PIR36552 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR36552 Gene

Publications for PIR36552 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR36552 Gene

Products for PIR36552 Gene

Sources for PIR36552 Gene

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