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Aliases for PIR35776 Gene

Subcategory (RNA class) for PIR35776 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR35776 Gene

No Aliases found

ORGUL Members for PIR35776 Gene

Previous GeneCards Identifiers for PIR35776 Gene

  • GC01M008504

No data available for External Ids for PIR35776 Gene

Summaries for PIR35776 Gene

GeneCards Summary for PIR35776 Gene

PIR35776 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR35776 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR35776

Additional gene information for PIR35776 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR35776 Gene

Genomics for PIR35776 Gene

GeneHancer (GH) Regulatory Elements for PIR35776 Gene

Promoters and enhancers for PIR35776 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J008443 Enhancer 0.5 ENCODE 650.7 +0.1 96 1.8 CTCF ZNF143 PRDM10 ZBTB33 RAD21 GC01M008444 PIR35776 RERE ENSG00000221083 LOC102724552
GH01J008437 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 +5.0 5029 3 PKNOX1 ARNT SIN3A FEZF1 ZNF2 ZNF121 GLIS2 ZNF213 KLF7 ATF7 RPL7P7 RERE RPL7AP18 PER3 ENSG00000221083 MIR34AHG GC01M008444 PIR35776 LOC102724552
GH01J008426 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.4 +16.4 16355 2.6 PKNOX1 STAT5A BMI1 BATF IRF4 ATF7 ETV6 BCLAF1 IKZF2 RUNX3 RERE ENSG00000221083 TNFRSF9 LOC102724552 PIR35776 GC01M008444
GH01J008459 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -19.0 -18983 7 ELF3 FOXA2 RAD21 YY1 SLC30A9 ZNF121 ZNF366 SCRT2 ZNF654 RXRA ENSG00000221083 RERE LOC102724552 PIR35776 GC01M008444 GC01M008496
GH01J008448 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -5.3 -5281 2.3 PKNOX1 DPF2 FEZF1 ZIC2 OSR2 CTBP1 PRDM6 ZNF316 EMSY MAFK RERE LOC102724552 ENSG00000221083 GC01M008444 PIR35776 GC01M008496
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR35776 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR35776 Gene

Genomic Locations for PIR35776 Gene
chr1:8,444,081-8,444,111
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand
chr1:8,504,141-8,504,171
(GRCh37/hg19)
Size:
31 bases
Orientation:
Minus strand

Genomic View for PIR35776 Gene

Genes around PIR35776 on UCSC Golden Path with GeneCards custom track

PIR35776 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR35776 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR35776 Gene

ORGUL Member Location for PIR35776 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR35776 Gene

Function for PIR35776 Gene

Phenotypes From GWAS Catalog for PIR35776 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR35776 Gene

Localization for PIR35776 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR35776 Gene

Pathways & Interactions for PIR35776 Gene

SuperPathways for PIR35776 Gene

No Data Available

Interacting Proteins for PIR35776 Gene

Gene Ontology (GO) - Biological Process for PIR35776 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR35776 Gene

Drugs & Compounds for PIR35776 Gene

No Compound Related Data Available

Transcripts for PIR35776 Gene

fRNAdb Secondary structures for PIR35776 Gene

  • FR041930

Alternative Splicing Database (ASD) splice patterns (SP) for PIR35776 Gene

No ASD Table

Relevant External Links for PIR35776 Gene

GeneLoc Exon Structure for
PIR35776

No data available for mRNA/cDNA for PIR35776 Gene

Expression for PIR35776 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR35776 Gene

Orthologs for PIR35776 Gene

No data available for Orthologs and Evolution for PIR35776 Gene

Paralogs for PIR35776 Gene

No data available for Paralogs for PIR35776 Gene

Variants for PIR35776 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR35776 Gene

Disorders for PIR35776 Gene

No disorders were found for PIR35776 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR35776 Gene

Publications for PIR35776 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR35776 Gene

Sources for PIR35776 Gene

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