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Aliases for PIR35642 Gene

Subcategory (RNA class) for PIR35642 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR35642 Gene

No Aliases found

ORGUL Members for PIR35642 Gene

Previous GeneCards Identifiers for PIR35642 Gene

  • GC02M043093

No data available for External Ids for PIR35642 Gene

Summaries for PIR35642 Gene

GeneCards Summary for PIR35642 Gene

PIR35642 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR35642 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR35642 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR35642 Gene

Genomics for PIR35642 Gene

GeneHancer (GH) Regulatory Elements for PIR35642 Gene

Promoters and enhancers for PIR35642 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J042865 Enhancer 0.8 Ensembl ENCODE dbSUPER 650.7 +0.0 38 1.6 RXRA HNF4A THRB PIR35642 HAAO COX7A2L GC02P042853 LOC105374567 GC02P042660
GH02J042878 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.8 -13765 4.1 FOSL1 EGR1 HLF MAX KDM1A RUNX3 NR2F2 OXER1 PIR35642 GC02P042853 LOC105374568 LOC105374567 GC02P042660
GH02J042853 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +12.4 12431 2.5 FOXA2 ZSCAN4 DMAP1 THRB ZNF48 RAD21 RARA YY1 ZNF207 RXRA GC02P042853 HAAO COX7A2L PIR35642 LOC105374567 GC02P042660
GH02J042872 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -8.3 -8301 5.4 SRF CAVIN1 MAX MAFG CEBPB CEBPG ZNF592 NR2F2 TEAD3 MITF OXER1 MTA3 HAAO PIR35642 GC02P042853 LOC105374568 LOC105374567 GC02P042660
GH02J042859 Enhancer 1 Ensembl ENCODE 0.4 +7.5 7535 0.3 ELF3 ARNT ARID4B BATF ZSCAN9 RAD21 ZNF614 ARID2 ZNF143 RCOR1 FTOP1 GC02P042853 PIR35642 LOC105374567 GC02P042660
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR35642 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR35642 Gene

Genomic Locations for PIR35642 Gene
chr2:42,866,737-42,866,766
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr2:43,093,877-43,093,906
(GRCh37/hg19)
Size:
30 bases
Orientation:
Minus strand

Genomic View for PIR35642 Gene

Genes around PIR35642 on UCSC Golden Path with GeneCards custom track

PIR35642 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR35642 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR35642 Gene

Function for PIR35642 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR35642 Gene

Localization for PIR35642 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR35642 Gene

Pathways & Interactions for PIR35642 Gene

SuperPathways for PIR35642 Gene

No Data Available

Interacting Proteins for PIR35642 Gene

Gene Ontology (GO) - Biological Process for PIR35642 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR35642 Gene

Drugs & Compounds for PIR35642 Gene

No Compound Related Data Available

Transcripts for PIR35642 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR35642 Gene

No ASD Table

Relevant External Links for PIR35642 Gene

GeneLoc Exon Structure for
PIR35642

No data available for mRNA/cDNA for PIR35642 Gene

Expression for PIR35642 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR35642 Gene

Orthologs for PIR35642 Gene

No data available for Orthologs and Evolution for PIR35642 Gene

Paralogs for PIR35642 Gene

No data available for Paralogs for PIR35642 Gene

Variants for PIR35642 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR35642 Gene

Disorders for PIR35642 Gene

No disorders were found for PIR35642 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR35642 Gene

Publications for PIR35642 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR35642 Gene

Sources for PIR35642 Gene

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