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Aliases for PIR35549 Gene

Subcategory (RNA class) for PIR35549 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR35549 Gene

No Aliases found

ORGUL Members for PIR35549 Gene

Previous GeneCards Identifiers for PIR35549 Gene

  • GC03P072051

No data available for External Ids for PIR35549 Gene

Summaries for PIR35549 Gene

GeneCards Summary for PIR35549 Gene

PIR35549 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR35549 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR35549 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR35549 Gene

Genomics for PIR35549 Gene

GeneHancer (GH) Regulatory Elements for PIR35549 Gene

Promoters and enhancers for PIR35549 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J072005 Enhancer 1.2 FANTOM5 Ensembl dbSUPER 0.7 +3.1 3082 0.5 MEIS2 KLF1 ATF1 PKNOX1 TAF9B BACH1 FOSL1 CC2D1A ZNF766 DIDO1 UBE2Q2P9 RYBP EIF4E3 GC03P072002 PIR35549
GH03J071998 Enhancer 1 FANTOM5 ENCODE dbSUPER 0.7 -2.6 -2567 2.3 FOSL1 L3MBTL2 ATF2 MGA ZNF395 RYBP GC03P072002 PIR35549 LOC105377157
GH03J071994 Enhancer 0.2 dbSUPER 0.4 -7.0 -7044 0.9 LOC105377157 PIR35549 GC03P072002
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR35549 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR35549 Gene

Genomic Locations for PIR35549 Gene
chr3:72,002,161-72,002,191
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chr3:72,051,312-72,051,342
(GRCh37/hg19)
Size:
31 bases
Orientation:
Plus strand

Genomic View for PIR35549 Gene

Genes around PIR35549 on UCSC Golden Path with GeneCards custom track

PIR35549 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR35549 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR35549 Gene

ORGUL Member Location for PIR35549 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR35549 Gene

Function for PIR35549 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR35549 Gene

Localization for PIR35549 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR35549 Gene

Pathways & Interactions for PIR35549 Gene

SuperPathways for PIR35549 Gene

No Data Available

Interacting Proteins for PIR35549 Gene

Gene Ontology (GO) - Biological Process for PIR35549 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR35549 Gene

Drugs & Compounds for PIR35549 Gene

No Compound Related Data Available

Transcripts for PIR35549 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR35549 Gene

No ASD Table

Relevant External Links for PIR35549 Gene

GeneLoc Exon Structure for
PIR35549

No data available for mRNA/cDNA for PIR35549 Gene

Expression for PIR35549 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR35549 Gene

Orthologs for PIR35549 Gene

No data available for Orthologs and Evolution for PIR35549 Gene

Paralogs for PIR35549 Gene

No data available for Paralogs for PIR35549 Gene

Variants for PIR35549 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR35549 Gene

Disorders for PIR35549 Gene

No disorders were found for PIR35549 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR35549 Gene

Publications for PIR35549 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR35549 Gene

Sources for PIR35549 Gene

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