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Aliases for PIR35543 Gene

Subcategory (RNA class) for PIR35543 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR35543 Gene

No Aliases found

ORGUL Members for PIR35543 Gene

Previous GeneCards Identifiers for PIR35543 Gene

  • GC15M051635
  • GC15M052055
  • GC15M052989
  • GC15M053459
  • GC15M054104
  • GC15M051345
  • GC15M052628
  • GC15M053989
  • GC15M054828
  • GC15M055305
  • GC15M055763
  • GC15M056194
  • GC15M056643

No data available for External Ids for PIR35543 Gene

Summaries for PIR35543 Gene

GeneCards Summary for PIR35543 Gene

PIR35543 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR35543 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR35543 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR35543 Gene

Genomics for PIR35543 Gene

GeneHancer (GH) Regulatory Elements for PIR35543 Gene

Promoters and enhancers for PIR35543 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J051303 Enhancer 0.6 ENCODE 650.7 -0.6 -568 0.2 CLOCK GATAD2B DPF2 ZKSCAN1 FOXA1 CTBP1 ZNF512B GATA3 RCOR1 MYC GC15M057487 GC15M057561 GC15M057567 GC15M057589 GC15M057602 GC15M057621 GC15M057626 GC15M057633 GC15M057637 GC15M057694
GH15J051302 Enhancer 0.3 FANTOM5 650.7 +0.1 137 0.4 GC15M057481 GC15M057487 GC15M057535 GC15M057561 GC15M057567 GC15M057589 GC15M057602 GC15M057621 GC15M057626 GC15M057630
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR35543 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR35543 Gene

Genomic Locations for PIR35543 Gene
chr15:51,303,142-51,303,171
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr15:51,595,339-51,595,368
(GRCh37/hg19)
Size:
30 bases
Orientation:
Minus strand

Genomic View for PIR35543 Gene

Genes around PIR35543 on UCSC Golden Path with GeneCards custom track

PIR35543 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR35543 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR35543 Gene

Function for PIR35543 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR35543 Gene

Localization for PIR35543 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR35543 Gene

Pathways & Interactions for PIR35543 Gene

SuperPathways for PIR35543 Gene

No Data Available

Interacting Proteins for PIR35543 Gene

Gene Ontology (GO) - Biological Process for PIR35543 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR35543 Gene

Drugs & Compounds for PIR35543 Gene

No Compound Related Data Available

Transcripts for PIR35543 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR35543 Gene

No ASD Table

Relevant External Links for PIR35543 Gene

GeneLoc Exon Structure for
PIR35543

No data available for mRNA/cDNA for PIR35543 Gene

Expression for PIR35543 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR35543 Gene

Orthologs for PIR35543 Gene

No data available for Orthologs and Evolution for PIR35543 Gene

Paralogs for PIR35543 Gene

No data available for Paralogs for PIR35543 Gene

Variants for PIR35543 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR35543 Gene

Disorders for PIR35543 Gene

No disorders were found for PIR35543 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR35543 Gene

Publications for PIR35543 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR35543 Gene

Sources for PIR35543 Gene

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