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Aliases for PIR35307 Gene

Subcategory (RNA class) for PIR35307 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR35307 Gene

No Aliases found

No data available for External Ids for PIR35307 Gene

Summaries for PIR35307 Gene

GeneCards Summary for PIR35307 Gene

PIR35307 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR35307 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR35307

Additional gene information for PIR35307 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR35307 Gene

Genomics for PIR35307 Gene

GeneHancer (GH) Regulatory Elements for PIR35307 Gene

Promoters and enhancers for PIR35307 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J055365 Enhancer 0.3 ENCODE 650.7 +1.4 1438 1.8 FEZF1 GC14M055368 PIR35307 PIR52112 PIR53477 LOC105370509 DLGAP5 TBPL2 ENSG00000259318 ATG14 GC14M054989
GH14J055373 Enhancer 1 FANTOM5 Ensembl ENCODE 0.4 -6.3 -6344 1.9 FOSL1 JUND NFATC1 IKZF1 FOS ATF7 RUNX3 IKZF2 LOC105370509 DLGAP5 ATG14 FBXO34 MAPK1IP1L PIR35307 PIR34697 GC14M054989
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR35307 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR35307 Gene

Genomic Locations for PIR35307 Gene
chr14:55,367,888-55,367,925
(GRCh38/hg38)
Size:
38 bases
Orientation:
Minus strand

Genomic View for PIR35307 Gene

Genes around PIR35307 on UCSC Golden Path with GeneCards custom track

PIR35307 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR35307 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR35307 Gene

ORGUL Member Location for PIR35307 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR35307 Gene

Function for PIR35307 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR35307 Gene

Localization for PIR35307 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR35307 Gene

Pathways & Interactions for PIR35307 Gene

SuperPathways for PIR35307 Gene

No Data Available

Interacting Proteins for PIR35307 Gene

Gene Ontology (GO) - Biological Process for PIR35307 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR35307 Gene

Drugs & Compounds for PIR35307 Gene

No Compound Related Data Available

Transcripts for PIR35307 Gene

fRNAdb Secondary structures for PIR35307 Gene

  • FR136988
  • FR009458

Alternative Splicing Database (ASD) splice patterns (SP) for PIR35307 Gene

No ASD Table

Relevant External Links for PIR35307 Gene

GeneLoc Exon Structure for
PIR35307

No data available for mRNA/cDNA for PIR35307 Gene

Expression for PIR35307 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR35307 Gene

Orthologs for PIR35307 Gene

No data available for Orthologs and Evolution for PIR35307 Gene

Paralogs for PIR35307 Gene

No data available for Paralogs for PIR35307 Gene

Variants for PIR35307 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR35307 Gene

Disorders for PIR35307 Gene

No disorders were found for PIR35307 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR35307 Gene

Publications for PIR35307 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR35307 Gene

Sources for PIR35307 Gene

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