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Aliases for PIR35238 Gene

Subcategory (RNA class) for PIR35238 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR35238 Gene

No Aliases found

ORGUL Members for PIR35238 Gene

No data available for External Ids for PIR35238 Gene

Summaries for PIR35238 Gene

GeneCards Summary for PIR35238 Gene

PIR35238 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR35238 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR35238 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR35238 Gene

Genomics for PIR35238 Gene

GeneHancer (GH) Regulatory Elements for PIR35238 Gene

Promoters and enhancers for PIR35238 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J025235 Enhancer 0.2 ENCODE 650.7 0.0 -39 1.4 PIR35238 ZKSCAN2 ENSG00000259955
GH16J025233 Enhancer 1 Ensembl ENCODE 0.7 +2.3 2342 0.4 RB1 ZNF2 RAD21 ZNF143 ATF7 CREM ZNF654 YY2 MXD4 REST ZKSCAN2 PIR35238 AQP8
GH16J025216 Promoter/Enhancer 1.3 EPDnew ENCODE 0.4 +19.2 19194 1.2 HDAC1 RAD21 CHAMP1 TCF12 ZNF766 GATA2 EGR1 ZFP91 ATF7 CEBPB AQP8 RBBP6 HMGN2P3 PIR35238
GH16J025225 Enhancer 1 Ensembl ENCODE 0.4 +10.6 10627 0.6 HDGF ELF3 RB1 RAD21 SLC30A9 ZNF335 ARID2 ZNF143 ATF7 ZNF654 ZKSCAN2 AQP8 PIR35238
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR35238 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR35238 Gene

Genomic Locations for PIR35238 Gene
chr16:25,236,098-25,236,127
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr16:25,247,419-25,247,448
(GRCh37/hg19)
Size:
30 bases
Orientation:
Minus strand

Genomic View for PIR35238 Gene

Genes around PIR35238 on UCSC Golden Path with GeneCards custom track

PIR35238 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR35238 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR35238 Gene

Function for PIR35238 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR35238 Gene

Localization for PIR35238 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR35238 Gene

Pathways & Interactions for PIR35238 Gene

SuperPathways for PIR35238 Gene

No Data Available

Interacting Proteins for PIR35238 Gene

Gene Ontology (GO) - Biological Process for PIR35238 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR35238 Gene

Drugs & Compounds for PIR35238 Gene

No Compound Related Data Available

Transcripts for PIR35238 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR35238 Gene

No ASD Table

Relevant External Links for PIR35238 Gene

GeneLoc Exon Structure for
PIR35238

No data available for mRNA/cDNA for PIR35238 Gene

Expression for PIR35238 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR35238 Gene

Orthologs for PIR35238 Gene

No data available for Orthologs and Evolution for PIR35238 Gene

Paralogs for PIR35238 Gene

No data available for Paralogs for PIR35238 Gene

Variants for PIR35238 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR35238 Gene

Disorders for PIR35238 Gene

No disorders were found for PIR35238 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR35238 Gene

Publications for PIR35238 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR35238 Gene

Sources for PIR35238 Gene

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