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Aliases for PIR35231 Gene

Subcategory (RNA class) for PIR35231 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR35231 Gene

No Aliases found

ORGUL Members for PIR35231 Gene

Previous GeneCards Identifiers for PIR35231 Gene

  • GC12P000573

No data available for External Ids for PIR35231 Gene

Summaries for PIR35231 Gene

GeneCards Summary for PIR35231 Gene

PIR35231 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR35231 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR35231 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR35231 Gene

Genomics for PIR35231 Gene

GeneHancer (GH) Regulatory Elements for PIR35231 Gene

Promoters and enhancers for PIR35231 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J000464 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 600.7 +0.8 784 1.8 PRDM1 ZNF600 ZNF341 MNT KLF9 ZBTB20 OSR2 PRDM4 ZFHX2 ZNF335 PIR35231 B4GALNT3 CCDC77 GC12P000495
GH12J000465 Enhancer 0.7 ENCODE dbSUPER 600.7 -1.2 -1225 0.2 SP7 TEAD1 FOXA1 SOX5 GC12P000462 PIR35231 B4GALNT3
GH12J000463 Enhancer 0.4 dbSUPER 600.7 -0.6 -560 0.5 ZNF652 FOXA2 PIR35231 B4GALNT3 GC12P000462
GH12J000468 Enhancer 0.7 ENCODE dbSUPER 0.7 +4.3 4329 1.1 BCL6 ZNF664 SMAD4 FOS RARA PRDM6 B4GALNT3 PIR35231 GC12P000495
GH12J000478 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +16.3 16306 3.6 ZNF121 ZNF644 GLIS2 ZNF600 ZIC2 ZNF692 ZNF341 SP2 ZBTB48 POLR2A B4GALNT3 GC12P000495 PIR35231
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR35231 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR35231 Gene

Genomic Locations for PIR35231 Gene
chr12:464,695-464,724
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr12:573,861-573,890
(GRCh37/hg19)
Size:
30 bases
Orientation:
Plus strand

Genomic View for PIR35231 Gene

Genes around PIR35231 on UCSC Golden Path with GeneCards custom track

PIR35231 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR35231 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR35231 Gene

Proteins for PIR35231 Gene

Post-translational modifications for PIR35231 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR35231 Gene

Domains & Families for PIR35231 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR35231 Gene

Function for PIR35231 Gene

Phenotypes From GWAS Catalog for PIR35231 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR35231 Gene

Localization for PIR35231 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR35231 Gene

Pathways & Interactions for PIR35231 Gene

PathCards logo

SuperPathways for PIR35231 Gene

No Data Available

Interacting Proteins for PIR35231 Gene

Gene Ontology (GO) - Biological Process for PIR35231 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR35231 Gene

Drugs & Compounds for PIR35231 Gene

No Compound Related Data Available

Transcripts for PIR35231 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR35231 Gene

No ASD Table

Relevant External Links for PIR35231 Gene

GeneLoc Exon Structure for
PIR35231

No data available for mRNA/cDNA for PIR35231 Gene

Expression for PIR35231 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR35231 Gene

Orthologs for PIR35231 Gene

No data available for Orthologs and Evolution for PIR35231 Gene

Paralogs for PIR35231 Gene

No data available for Paralogs for PIR35231 Gene

Variants for PIR35231 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR35231 Gene

Disorders for PIR35231 Gene

No disorders were found for PIR35231 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR35231 Gene

Publications for PIR35231 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR35231 Gene

Products for PIR35231 Gene

Sources for PIR35231 Gene

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