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Aliases for PIR35041 Gene

Subcategory (RNA class) for PIR35041 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR35041 Gene

No Aliases found

ORGUL Members for PIR35041 Gene

No data available for External Ids for PIR35041 Gene

Summaries for PIR35041 Gene

GeneCards Summary for PIR35041 Gene

PIR35041 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR35041 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR35041 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR35041 Gene

Genomics for PIR35041 Gene

GeneHancer (GH) Regulatory Elements for PIR35041 Gene

Promoters and enhancers for PIR35041 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J034898 Enhancer 0.6 ENCODE 0.7 -4.4 -4361 0.2 GATAD2A CTCF ZNF654 RB1 TRIM22 NCOA1 REST ZEB2 RAD21 CC2D1A PIR35041 GC05P034888 TTC23L
GH05J034889 Enhancer 0.8 ENCODE 0.4 -13.2 -13211 0.2 ELF3 FOXA2 RARA ZNF614 MIXL1 SP5 PPARG NFIL3 RCOR2 ETV4 GC05P034888 ENSG00000250234 RAI14 PIR35041 TTC23L
GH05J034891 Enhancer 0.4 ENCODE 0.4 -10.7 -10745 0.8 ZNF148 POLR2A ENSG00000250234 RAI14 DNAJC21 GC05P034888 PIR35041 TTC23L
GH05J034914 Enhancer 0.2 ENCODE 0.4 +10.5 10539 0.1 BRIX1 RAD1 PIR35041 GC05P034888
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR35041 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR35041 Gene

Genomic Locations for PIR35041 Gene
chr5:34,902,822-34,902,851
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr5:34,902,927-34,902,956
(GRCh37/hg19)
Size:
30 bases
Orientation:
Plus strand

Genomic View for PIR35041 Gene

Genes around PIR35041 on UCSC Golden Path with GeneCards custom track

PIR35041 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR35041 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR35041 Gene

Function for PIR35041 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR35041 Gene

Localization for PIR35041 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR35041 Gene

Pathways & Interactions for PIR35041 Gene

SuperPathways for PIR35041 Gene

No Data Available

Interacting Proteins for PIR35041 Gene

Gene Ontology (GO) - Biological Process for PIR35041 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR35041 Gene

Drugs & Compounds for PIR35041 Gene

No Compound Related Data Available

Transcripts for PIR35041 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR35041 Gene

No ASD Table

Relevant External Links for PIR35041 Gene

GeneLoc Exon Structure for
PIR35041

No data available for mRNA/cDNA for PIR35041 Gene

Expression for PIR35041 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR35041 Gene

Orthologs for PIR35041 Gene

No data available for Orthologs and Evolution for PIR35041 Gene

Paralogs for PIR35041 Gene

No data available for Paralogs for PIR35041 Gene

Variants for PIR35041 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR35041 Gene

Disorders for PIR35041 Gene

No disorders were found for PIR35041 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR35041 Gene

Publications for PIR35041 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR35041 Gene

Sources for PIR35041 Gene

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